RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 GPR37O15354 613 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 IGHV2-70P01814 119 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 SRP19P09132 144 aaKnown RBP8.34□□□□□ -1.07
CDH13-204ENST00000539548 MMP9P14780 707 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 HOXA5P20719 270 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 GNRHRP30968 328 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 NOVA1P51513 510 aaKnown RBP8.34□□□□□ -1.07
CDH13-204ENST00000539548 RAC3P60763 192 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 PSG4Q00888 419 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 SRSF7Q16629 238 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDH13-204ENST00000539548 TMEM252Q8N6L7 170 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 Q8NFD4 153 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 MR1Q95460 341 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 CCDC74BQ96LY2 380 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 ABHD14AQ9BUJ0 271 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 ZNF700Q9H0M5 742 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 HIPK2Q9H2X6 1198 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 ZNF442Q9H7R0 627 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 CRLF2Q9HC73 371 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 LYRM2Q9NU23 88 aaPredicted RBP8.34□□□□□ -1.07
CDH13-204ENST00000539548 FAM86C1Q9NVL1 165 aa8.34□□□□□ -1.07
CDH13-204ENST00000539548 MRPS17Q9Y2R5 130 aaKnown RBP8.34□□□□□ -1.07
CDH13-204ENST00000539548 UBE2J1Q9Y385 318 aaPredicted RBP8.34□□□□□ -1.07
CDH13-204ENST00000539548 IGHV1-45A0A0A0MS14 117 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 LY6G6EA0A0G2JKS1 128 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 DUXBA0A1W2PPF3 345 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 CLEC18AA5D8T8 446 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A10PA6NDY2 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A18PA6NE21 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A16PA6NEW6 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A20PA6NIJ5 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A8PA6NJQ4 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A7PA6NKC0 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A22PA8MWA6 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A12PA8MX19 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A5PA8MXJ8 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A23PA8MXZ1 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 PROB1E7EW31 1015 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 RPL36A-HNRNPH2H7BZ11 118 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 HSD17B6O14756 317 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 CBR3O75828 277 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A15PP0C7V4 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A13PP0C7W8 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A14PP0C7W9 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM90A24PP0C7X0 464 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 NTF4P34130 210 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 HTR5AP47898 357 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 SSR4P51571 173 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 PRSS12P56730 875 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 ZNF92Q03936 586 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 DAZAP2Q15038 168 aaPredicted RBP8.34□□□□□ -1.08
CDH13-204ENST00000539548 IGSF11Q5DX21 431 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 TRIM61Q5EBN2 209 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 FAM209BQ5JX69 171 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 TBC1D26Q86UD7 250 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 WDR5BQ86VZ2 330 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 ZNF695Q8IW36 515 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 ZFP62Q8NB50 900 aaPredicted RBP8.34□□□□□ -1.08
CDH13-204ENST00000539548 CLEC18CQ8NCF0 446 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 AKR7LQ8NHP1 331 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 GNPNAT1Q96EK6 184 aaPredicted RBP8.34□□□□□ -1.08
CDH13-204ENST00000539548 PRDM6Q9NQX0 595 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 RFNGQ9Y644 331 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 U3KQA8 63 aa8.34□□□□□ -1.08
CDH13-204ENST00000539548 TRAV20A0A0B4J274 112 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 ZNF816-ZNF321PA0A0X1KG74 233 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 CEACAM1P13688 526 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 VAMP2P63027 116 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 ID3Q02535 119 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 KIAA0141Q14154 515 aaPredicted RBP8.33□□□□□ -1.08
CDH13-204ENST00000539548 PDCD1Q15116 288 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 ZNF506Q5JVG8 444 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 ACER2Q5QJU3 275 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 PLCXD3Q63HM9 321 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 M1APQ8TC57 530 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 TMEM171Q8WVE6 324 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 EDARADDQ8WWZ3 215 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 PIGCQ92535 297 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 RAB39BQ96DA2 213 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 JSRP1Q96MG2 331 aaPredicted RBP8.33□□□□□ -1.08
CDH13-204ENST00000539548 DUSP23Q9BVJ7 150 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 PHF7Q9BWX1 381 aaPredicted RBP8.33□□□□□ -1.08
CDH13-204ENST00000539548 OR2H1Q9GZK4 316 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 TOLLIPQ9H0E2 274 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 WNT5BQ9H1J7 359 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 SLC7A10Q9NS82 523 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 P4HTMQ9NXG6 502 aa8.33□□□□□ -1.08
CDH13-204ENST00000539548 CXorf65A6NEN9 183 aa8.32□□□□□ -1.08
CDH13-204ENST00000539548 CDRT15L2A8MXV6 281 aa8.32□□□□□ -1.08
CDH13-204ENST00000539548 G3V3Y1 287 aa8.32□□□□□ -1.08
CDH13-204ENST00000539548 HSPB1P04792 205 aaKnown RBP8.32□□□□□ -1.08
CDH13-204ENST00000539548 PATE4P0C8F1 98 aa8.32□□□□□ -1.08
CDH13-204ENST00000539548 FGF5P12034 268 aa8.32□□□□□ -1.08
CDH13-204ENST00000539548 OMGP23515 440 aa8.32□□□□□ -1.08
CDH13-204ENST00000539548 ITGA3P26006 1051 aa8.32□□□□□ -1.08
CDH13-204ENST00000539548 TAGLN2P37802 199 aaKnown RBP8.32□□□□□ -1.08
CDH13-204ENST00000539548 RPS10P46783 165 aaKnown RBP8.32□□□□□ -1.08
CDH13-204ENST00000539548 DYNLT3P51808 116 aa8.32□□□□□ -1.08
CDH13-204ENST00000539548 CLDN15P56746 228 aa8.32□□□□□ -1.08
CDH13-204ENST00000539548 B3GALT5-AS1P59052 145 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms