RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 BRICD5Q6PL45 260 aa12.91□□□□□ -0.34
RPAIN-206ENST00000539417 GDPD3Q7L5L3 318 aa12.91□□□□□ -0.34
RPAIN-206ENST00000539417 CDH26Q8IXH8 852 aa12.91□□□□□ -0.34
RPAIN-206ENST00000539417 BPIFB2Q8N4F0 458 aa12.91□□□□□ -0.34
RPAIN-206ENST00000539417 NKAIN3Q8N8D7 197 aa12.91□□□□□ -0.34
RPAIN-206ENST00000539417 ESM1Q9NQ30 184 aa12.91□□□□□ -0.34
RPAIN-206ENST00000539417 GLS2Q9UI32 602 aa12.91□□□□□ -0.34
RPAIN-206ENST00000539417 CCRL2O00421 344 aa12.9□□□□□ -0.34
RPAIN-206ENST00000539417 MGST3O14880 152 aa12.9□□□□□ -0.34
RPAIN-206ENST00000539417 PSMA1P25786 263 aaKnown RBP12.9□□□□□ -0.34
RPAIN-206ENST00000539417 IL13RA2Q14627 380 aa12.9□□□□□ -0.34
RPAIN-206ENST00000539417 C1orf100Q5SVJ3 147 aa12.9□□□□□ -0.34
RPAIN-206ENST00000539417 SYT6Q5T7P8 510 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-206ENST00000539417 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.34
RPAIN-206ENST00000539417 PLPPR1Q8TBJ4 325 aa12.9□□□□□ -0.34
RPAIN-206ENST00000539417 TBC1D15Q8TC07 691 aa12.9□□□□□ -0.34
RPAIN-206ENST00000539417 FCGR1BQ92637 280 aa12.9□□□□□ -0.34
RPAIN-206ENST00000539417 BATF3Q9NR55 127 aa12.9□□□□□ -0.34
RPAIN-206ENST00000539417 DNHD1Q96M86 4753 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 ATRQ13535 2644 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 IGHV1-69DA0A0B4J2H0 117 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 TRDV1A0A1B0GX56 115 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 MEGF11A6BM72 1044 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 M0R1W7 72 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 IFNA2P01563 188 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 IGHV1-69P01742 117 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 CSTBP04080 98 aaKnown RBP12.89□□□□□ -0.35
RPAIN-206ENST00000539417 TAF9Q16594 264 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 NHLRC3Q5JS37 347 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 GPR157Q5UAW9 335 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 C22orf42Q6IC83 251 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 TEX29Q8N6K0 151 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 SIGLECL1Q8N7X8 197 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 OR5D13Q8NGL4 314 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 FAM46BQ96A09 425 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 SLC25A28Q96A46 364 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 DMRTB1Q96MA1 342 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 S100A13Q99584 98 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 MDFIQ99750 246 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 UQCC2Q9BRT2 126 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 MS4A7Q9GZW8 240 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-206ENST00000539417 OR51E2Q9H255 320 aa12.89□□□□□ -0.35
RPAIN-206ENST00000539417 MMP23AO75900 390 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 ARL6IP5O75915 188 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 OR7C1O76099 320 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-206ENST00000539417 VSIG8P0DPA2 414 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 BMXP51813 675 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 P2RX3P56373 397 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 OR10A3P58181 314 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 P2RY14Q15391 338 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 DEFB112Q30KQ8 113 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 PAN3Q58A45 887 aaKnown RBP12.88□□□□□ -0.35
RPAIN-206ENST00000539417 GLT8D1Q68CQ7 371 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 BAIAP2L2Q6UXY1 529 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 ZNF782Q6ZMW2 699 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-206ENST00000539417 C9orf139Q6ZV77 190 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 RTN4RL2Q86UN3 420 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 NR2C2APQ86WQ0 139 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 CMTM4Q8IZR5 234 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 SUMF2Q8NBJ7 301 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 CHST4Q8NCG5 386 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 TSPAN14Q8NG11 270 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 DUX5Q96PT3 197 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 RNF167Q9H6Y7 350 aa12.88□□□□□ -0.35
RPAIN-206ENST00000539417 TRAV39A0A0B4J263 110 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 SMIM30A4D0T7 59 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 C17orf98A8MV24 154 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 SLC22A1O15245 554 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 CRTAPO75718 401 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-206ENST00000539417 TNFAIP8O95379 198 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 GTF2F2P13984 249 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 MGMTP16455 207 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 PRTN3P24158 256 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 CLDN12P56749 244 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 QRFPP83859 136 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 PLA2G7Q13093 441 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 UNC119Q13432 240 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 KRTAP24-1Q3LI83 254 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 UTF1Q5T230 341 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 SIGIRRQ6IA17 410 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 C1orf122Q6ZSJ8 110 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 ZDHHC22Q8N966 263 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 C17orf50Q8WW18 174 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 SELENOIQ9C0D9 397 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 SLITRK2Q9H156 845 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 ZNF696Q9H7X3 374 aa12.87□□□□□ -0.35
RPAIN-206ENST00000539417 METTL8Q9H825 291 aaKnown RBP12.87□□□□□ -0.35
RPAIN-206ENST00000539417 UNKLQ9H9P5 680 aaKnown RBP12.87□□□□□ -0.35
RPAIN-206ENST00000539417 TXNL4BQ9NX01 149 aaKnown RBP12.87□□□□□ -0.35
RPAIN-206ENST00000539417 A0A0U1RQK1 487 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 TCF21O43680 179 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 ZNF780AO75290 641 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-206ENST00000539417 CSN2P05814 226 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 ZNF728P0DKX0 622 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 GADD45AP24522 165 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 FPR2P25090 351 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 PAX6P26367 422 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 HTR2CP28335 458 aa12.86□□□□□ -0.35
RPAIN-206ENST00000539417 ERP29P30040 261 aaKnown RBP12.86□□□□□ -0.35
RPAIN-206ENST00000539417 GDNFP39905 211 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms