RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 A0A1W2PPH5 198 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 A0A1W2PPK0 400 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 MEGF11A6BM72 1044 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 ODF3BA8MYP8 253 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 OCMP0CE72 109 aaPredicted RBP11.16□□□□□ -0.62
CD9-208ENST00000538834 HKR1P10072 659 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 P2RX3P56373 397 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 RBM11P57052 281 aaKnown RBP11.16□□□□□ -0.62
CD9-208ENST00000538834 PRB3Q04118 309 aaPredicted RBP11.16□□□□□ -0.62
CD9-208ENST00000538834 EMX1Q04741 257 aaPredicted RBP11.16□□□□□ -0.62
CD9-208ENST00000538834 BAMBIQ13145 260 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 BLMHQ13867 455 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 MED22Q15528 200 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 GRK1Q15835 563 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 LDLRAD2Q5SZI1 272 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 FAM27D1Q5T7N8 215 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 CD200R1LQ6Q8B3 271 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 SATL1Q86VE3 508 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 OR11H6Q8NGC7 330 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 OR4D6Q8NGJ1 314 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 PPP1R35Q8TAP8 253 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 MGLLQ99685 303 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 UQCC2Q9BRT2 126 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 CHST6Q9GZX3 395 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 METTL9Q9H1A3 318 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 ACOT13Q9NPJ3 140 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 TAS2R3Q9NYW6 316 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 ZNF581Q9P0T4 197 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 ZNRD1Q9P1U0 126 aa11.16□□□□□ -0.62
CD9-208ENST00000538834 UBE2J1Q9Y385 318 aaPredicted RBP11.16□□□□□ -0.62
CD9-208ENST00000538834 A0A1W2PP11 408 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 hADV38S2A0JD32 116 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 SIRPB1O00241 398 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.62
CD9-208ENST00000538834 ZNF780AO75290 641 aaPredicted RBP11.15□□□□□ -0.62
CD9-208ENST00000538834 IGHV1-8P0DP01 117 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 SAA4P35542 130 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 MAP2K4P45985 399 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 GLIPR1P48060 266 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 TRAM1Q15629 374 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 SSX1Q16384 188 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 PIGYQ3MUY2 71 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 LIPKQ5VXJ0 399 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 C16orf87Q6PH81 154 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 RBMS3Q6XE24 437 aaKnown RBP11.15□□□□□ -0.62
CD9-208ENST00000538834 LINC00596Q86U02 117 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 GAPTQ8N292 157 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 OSR2Q8N2R0 312 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 PNKDQ8N490 385 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 TPRX1Q8N7U7 411 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 NKAIN3Q8N8D7 197 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 BEND2Q8NDZ0 799 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 OR10K1Q8NGX5 313 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 MRPS24Q96EL2 167 aaKnown RBP11.15□□□□□ -0.62
CD9-208ENST00000538834 ZNF714Q96N38 554 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 GPER1Q99527 375 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 GFI1Q99684 422 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 HEXA-AS1Q9H8Q6 139 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 RCC2Q9P258 522 aaKnown RBP11.15□□□□□ -0.62
CD9-208ENST00000538834 CKLFQ9UBR5 152 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 BLOC1S6Q9UL45 172 aa11.15□□□□□ -0.62
CD9-208ENST00000538834 A0A087X0M5 115 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 A0A1B0GX30 115 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 DEGS1O15121 323 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 MMP23AO75900 390 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 SRMP19623 302 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 GABRR1P24046 479 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 CD34P28906 385 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 KCNJ3P48549 501 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 SNU13P55769 128 aaKnown RBP11.14□□□□□ -0.63
CD9-208ENST00000538834 EDDM3BP56851 147 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 RPL15P61313 204 aaKnown RBP11.14□□□□□ -0.63
CD9-208ENST00000538834 AESQ08117 197 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 RSU1Q15404 277 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 AANATQ16613 207 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 MPV17LQ2QL34 196 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 UBE2UQ5VVX9 321 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 RSBN1Q5VWQ0 802 aaPredicted RBP11.14□□□□□ -0.63
CD9-208ENST00000538834 ZNF626Q68DY1 528 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 HEPN1Q6WQI6 88 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 PDZD9Q8IXQ8 264 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 PLPPR1Q8TBJ4 325 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 C17orf50Q8WW18 174 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 SSMEM1Q8WWF3 244 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 UFD1Q92890 307 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 PPA2Q9H2U2 334 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 ST3GAL6Q9Y274 331 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 LRRC42Q9Y546 428 aa11.14□□□□□ -0.63
CD9-208ENST00000538834 hCG_1809904A0A1W2PP81 198 aa11.13□□□□□ -0.63
CD9-208ENST00000538834 A0A1W2PPE2 198 aa11.13□□□□□ -0.63
CD9-208ENST00000538834 A0A1W2PR64 198 aa11.13□□□□□ -0.63
CD9-208ENST00000538834 A0A1W2PRV1 198 aa11.13□□□□□ -0.63
CD9-208ENST00000538834 ODAMA1E959 279 aa11.13□□□□□ -0.63
CD9-208ENST00000538834 FUOMA2VDF0 154 aa11.13□□□□□ -0.63
CD9-208ENST00000538834 FAM90A10PA6NDY2 464 aa11.13□□□□□ -0.63
CD9-208ENST00000538834 FAM90A18PA6NE21 464 aa11.13□□□□□ -0.63
CD9-208ENST00000538834 FAM90A16PA6NEW6 464 aa11.13□□□□□ -0.63
CD9-208ENST00000538834 FAM90A20PA6NIJ5 464 aa11.13□□□□□ -0.63
CD9-208ENST00000538834 FAM90A7PA6NKC0 464 aa11.13□□□□□ -0.63
CD9-208ENST00000538834 FAM90A22PA8MWA6 464 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms