RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CARD17Q5XLA6 110 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 ABLIM2Q6H8Q1 611 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 SUMF1Q8NBK3 374 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 OR14J1Q9UGF5 321 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 PIGLQ9Y2B2 252 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 GCGP01275 180 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 MYBPHQ13203 477 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 OR1P1Q8NH06 330 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 POM121Q96HA1 1249 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 CTDSP1Q9GZU7 261 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 METTL9Q9H1A3 318 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 ZNF160Q9HCG1 818 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 IGHV5-51A0A0C4DH38 117 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 TRAF3IP2O43734 574 aaPredicted RBP16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 DFFBO76075 338 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 EPHA1P21709 976 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 HOXA6P31267 233 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 COA6Q5JTJ3 125 aaKnown RBP16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 SRD5A3Q9H8P0 318 aa16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 CISD1Q9NZ45 108 aaKnown RBP16.13■□□□□ 0.17
SFSWAP-207ENST00000538548 C3orf85A0A1B0GTC6 90 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 CST7O76096 145 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 IL18BPO95998 194 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 FOSL2P15408 326 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 RELQ04864 619 aaPredicted RBP16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 ZFP36L1Q07352 338 aaKnown RBP16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 C10orf35Q96D05 121 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 TMEM222Q9H0R3 208 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 SDF2L1Q9HCN8 221 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 GNG13Q9P2W3 67 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 PTRH2Q9Y3E5 179 aaKnown RBP16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 SPTY2D1-AS1A0A0U1RR47 76 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 SHISA8B8ZZ34 492 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 EREGO14944 169 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 TAS2R30P59541 319 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 HERV-K104P61576 105 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 TNFRSF9Q07011 255 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 ODF3L1Q8IXM7 274 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 TMEM123Q8N131 208 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 ADPRHL1Q8NDY3 354 aa16.12■□□□□ 0.17
SFSWAP-207ENST00000538548 NCOA6Q14686 2063 aaPredicted RBP16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 MPPED1O15442 326 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 BCL2P10415 239 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 CDCP2Q5VXM1 449 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 ZNF880Q6PDB4 577 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 Q6ZSR3 168 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 DTX1Q86Y01 620 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 H1FOOQ8IZA3 346 aaPredicted RBP16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 TMEM217Q8N7C4 229 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 NAXEQ8NCW5 288 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 MAGT1Q9H0U3 335 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 ZNF286AQ9HBT8 521 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 THADAQ6YHU6 1953 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 F5H5K5 113 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 EFNA2O43921 213 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 COX5BP10606 129 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 APLNRP35414 380 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 GFERP55789 205 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 MTCP1P56278 107 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 ZNF581Q9P0T4 197 aa16.11■□□□□ 0.17
SFSWAP-207ENST00000538548 RTTNQ86VV8 2226 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 FAM221AA4D161 298 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 ZNF705GA8MUZ8 300 aaPredicted RBP16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 MMP9P14780 707 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 RNF4P78317 190 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 HIST3H3Q16695 136 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 SLC25A26Q70HW3 274 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 PRSS58Q8IYP2 241 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 FAM185AQ8N0U4 392 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 DNASE2BQ8WZ79 361 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 TMEM56Q96MV1 263 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 CDCA3Q99618 268 aaPredicted RBP16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 ATP5SQ99766 215 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 TMEM56-RWDD3S4R434 201 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 ETV2O00321 342 aaPredicted RBP16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 ANGPTL7O43827 346 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 MDKP21741 143 aaPredicted RBP16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 IGFBP4P22692 258 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 FBXW4P57775 412 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 COL10A1Q03692 680 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 CXorf66Q5JRM2 361 aaPredicted RBP16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 IL22RA1Q8N6P7 574 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 DYRK2Q92630 601 aa16.1■□□□□ 0.17
SFSWAP-207ENST00000538548 AADACP22760 399 aa16.09■□□□□ 0.17
SFSWAP-207ENST00000538548 HNF4GQ14541 408 aa16.09■□□□□ 0.17
SFSWAP-207ENST00000538548 LANCL3Q6ZV70 420 aa16.09■□□□□ 0.17
SFSWAP-207ENST00000538548 ZNF695Q8IW36 515 aa16.09■□□□□ 0.17
SFSWAP-207ENST00000538548 LRFN1Q9P244 771 aa16.09■□□□□ 0.17
SFSWAP-207ENST00000538548 TMEM50AO95807 157 aa16.09■□□□□ 0.17
SFSWAP-207ENST00000538548 TK1P04183 234 aa16.09■□□□□ 0.17
SFSWAP-207ENST00000538548 SFTPCP11686 197 aa16.09■□□□□ 0.17
SFSWAP-207ENST00000538548 VAX2Q9UIW0 290 aa16.09■□□□□ 0.17
SFSWAP-207ENST00000538548 UBE2J1Q9Y385 318 aaPredicted RBP16.09■□□□□ 0.17
SFSWAP-207ENST00000538548 SHISA7A6NL88 538 aa16.08■□□□□ 0.17
SFSWAP-207ENST00000538548 ZFP92A6NM28 416 aa16.08■□□□□ 0.17
SFSWAP-207ENST00000538548 IL24Q13007 206 aa16.08■□□□□ 0.17
SFSWAP-207ENST00000538548 MPV17LQ2QL34 196 aa16.08■□□□□ 0.17
SFSWAP-207ENST00000538548 C16orf47Q6ZP98 133 aaPredicted RBP16.08■□□□□ 0.17
SFSWAP-207ENST00000538548 CA5BP1Q8WTZ4 195 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms