RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 BOLA1Q9Y3E2 137 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 URGCP-MRPS24S4R325 110 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 V9GYS6 101 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 MTCL1Q9Y4B5 1905 aaKnown RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 J3QT63 122 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 SOCS1O15524 211 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 DNPH1O43598 174 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 DUS4LO95620 317 aaKnown RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 CBR1P16152 277 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 GABRB1P18505 474 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 ORM2P19652 201 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 H3F3AP84243 136 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 PXDC1Q5TGL8 231 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 HIST2H3AQ71DI3 136 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 BAGE3Q86Y29 109 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 BAGE2Q86Y30 109 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 OR52L2PQ8NGH6 319 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 OR5R1Q8NH85 324 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 SCARF2Q96GP6 870 aaPredicted RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 AKIRIN1Q9H9L7 192 aaPredicted RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 SLC31A2O15432 143 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 CELA3AP09093 270 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 RPL35P42766 123 aaKnown RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 CRYBB2P43320 205 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 RPL31P62899 125 aaKnown RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 SVBPQ8N300 66 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 TPRX1Q8N7U7 411 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 OR4S2Q8NH73 311 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 LHX4Q969G2 390 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 SFXN3Q9BWM7 321 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 ZNF331Q9NQX6 463 aaPredicted RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 CACNG5Q9UF02 275 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 IGHV3-21A0A0B4J1V1 117 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 MS4A18H0YCH9 400 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 ADAM10O14672 748 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 TAAR5O14804 337 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 JTBO76095 146 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 MBP02144 154 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 OR5AC1P0C628 307 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 LIMS3P0CW19 117 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 LIMS4P0CW20 117 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 PRDX2P32119 198 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 BAK1Q16611 211 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 ST3GAL2Q16842 350 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 MS4A18Q3C1V0 323 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 ZNF260Q3ZCT1 412 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 TMEM128Q5BJH2 165 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 ZBTB44Q8NCP5 570 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 R3HDM4Q96D70 268 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 SPSB2Q99619 263 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 ADAM19Q9H013 955 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 C1RLQ9NZP8 487 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 KLK13Q9UKR3 277 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 ATP6V1G2-DDX39BF2Z307 99 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 PGA4P0DJD7 388 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 PGA3P0DJD8 388 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 PDLIM4P50479 330 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 SSBP1Q04837 148 aaKnown RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 LY6EQ16553 131 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 TIGITQ495A1 244 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 TBC1D26Q86UD7 250 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 OR5A2Q8NGI9 324 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 SLC52A3Q9NQ40 469 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 GAB2Q9UQC2 676 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 LANCL1O43813 399 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 HMGN3Q15651 99 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 FFAR4Q5NUL3 377 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 SSX8Q7RTT4 187 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 DRAXINQ8NBI3 349 aaPredicted RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 SLC26A10Q8NG04 563 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 TMED6Q8WW62 240 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 PLEKHA2Q9HB19 425 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 MRPL22Q9NWU5 206 aaKnown RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 PRR13Q9NZ81 148 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 ZNF236Q9UL36 1845 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 XKRY2A2RUG3 117 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 CEBPDP49716 269 aaPredicted RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 ERVFRD-1P60508 538 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 ZNF770Q6IQ21 691 aaPredicted RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 OR10A7Q8NGE5 316 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 ZNF519Q8TB69 540 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 SMIM4Q8WVI0 70 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 NEIL1Q96FI4 390 aaPredicted RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 ZNF714Q96N38 554 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 ABHD14AQ9BUJ0 271 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 SLC17A5Q9NRA2 495 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 CA10Q9NS85 328 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 PTPRZ1P23471 2315 aaPredicted RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 OR2J3O76001 311 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 SCGB1D1O95968 90 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 SLC25A5P05141 298 aaKnown RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 ZP4Q12836 540 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 ACSF3Q4G176 576 aaPredicted RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 RPUSD3Q6P087 351 aaKnown RBP4.67□□□□□ -1.66
LRP6-203ENST00000538239 ZNF826PQ6ZT77 177 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 PPP1R1CQ8WVI7 109 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 TIMP4Q99727 224 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 TMEM231Q9H6L2 316 aa4.67□□□□□ -1.66
LRP6-203ENST00000538239 RASL12Q9NYN1 266 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms