RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 LRTM2Q8N967 370 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 CNTNAP3BQ96NU0 1288 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 CNTNAP3Q9BZ76 1288 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 FBXO9Q9UK97 447 aaPredicted RBP13.38□□□□□ -0.27
MKS1-204ENST00000537529 KCNMB2Q9Y691 235 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 A0A1W2PR80 420 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 FGF2P09038 288 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 TCF15Q12870 199 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 OR2A2Q6IF42 318 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 LIAT1Q6ZQX7 453 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 LGI3Q8N145 548 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 EIF4E3Q8N5X7 224 aaKnown RBP13.38□□□□□ -0.27
MKS1-204ENST00000537529 SUMF2Q8NBJ7 301 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 C1orf162Q8NEQ5 155 aaPredicted RBP13.38□□□□□ -0.27
MKS1-204ENST00000537529 ZNF488Q96MN9 340 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 NUP50Q9UKX7 468 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 LRP5LA4QPB2 252 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 MSGN1A6NI15 193 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 A8MXK9 166 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 TRDCB7Z8K6 153 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 HSPB6O14558 160 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 CTXN2P0C2S0 81 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 SELEP16581 610 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 DUSP1P28562 367 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 SP6Q3SY56 376 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 ZADH2Q8N4Q0 377 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 C9orf106Q8NAJ2 232 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 BVESQ8NE79 360 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 OR2J1Q9GZK6 312 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 OTOGLQ3ZCN5 2332 aa13.37□□□□□ -0.27
MKS1-204ENST00000537529 KRBOX1C9JBD0 128 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 SLC34A2O95436 690 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 RAC2P15153 192 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 COX5AP20674 150 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 KIR2DL2P43627 348 aaPredicted RBP13.36□□□□□ -0.27
MKS1-204ENST00000537529 TSC22D1Q15714 1073 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 ACSF3Q4G176 576 aaPredicted RBP13.36□□□□□ -0.27
MKS1-204ENST00000537529 FOXRED2Q8IWF2 684 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 BAP18Q8IXM2 172 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 OR11L1Q8NGX0 322 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 CCDC120Q96HB5 630 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 SLX1AQ9BQ83 275 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 C1QTNF6Q9BXI9 259 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 DNTTIP1Q9H147 329 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 IFT22Q9H7X7 185 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 CYTL1Q9NRR1 136 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 POLDIP2Q9Y2S7 368 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 FREM2Q5SZK8 3169 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 TRBV6-6A0A0A6YYG2 114 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 H7C1Q1 480 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 BET1O15155 118 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 DEDDO75618 318 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 CEACAM1P13688 526 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 CBR1P16152 277 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 SRPXP78539 464 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 ZNF585AQ6P3V2 769 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 Q8IYB0 196 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 ZNF565Q8N9K5 539 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 BOD1Q96IK1 185 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 C18orf12Q96KH6 178 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 ADAT1Q9BUB4 502 aaKnown RBP13.36□□□□□ -0.27
MKS1-204ENST00000537529 SLC5A7Q9GZV3 580 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 ZC4H2Q9NQZ6 224 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 ATP23Q9Y6H3 246 aa13.36□□□□□ -0.27
MKS1-204ENST00000537529 CACNA1HO95180 2353 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 AHRRA9YTQ3 701 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 TAAR5O14804 337 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 PHF1O43189 567 aaPredicted RBP13.35□□□□□ -0.27
MKS1-204ENST00000537529 WISP2O76076 250 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 SCTP09683 121 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 NOVA1P51513 510 aaKnown RBP13.35□□□□□ -0.27
MKS1-204ENST00000537529 EIF5AP63241 154 aaKnown RBP13.35□□□□□ -0.27
MKS1-204ENST00000537529 ZNF169Q14929 603 aaPredicted RBP13.35□□□□□ -0.27
MKS1-204ENST00000537529 FAM219AQ8IW50 185 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 PRSS33Q8NF86 280 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 OR1J1Q8NGS3 322 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 SLC25A40Q8TBP6 338 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 MRPL30Q8TCC3 161 aaKnown RBP13.35□□□□□ -0.27
MKS1-204ENST00000537529 MSI2Q96DH6 328 aaKnown RBP13.35□□□□□ -0.27
MKS1-204ENST00000537529 ZFP57Q9NU63 452 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 ZNF318Q5VUA4 2279 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 TRAV24A0A0B4J272 114 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 IQCF6A8MYZ5 107 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 TEX46H3BTG2 121 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 MPPED1O15442 326 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 RHBDL1O75783 438 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 SPINK2P20155 84 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 UCP2P55851 309 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 ERVS71-1P61550 626 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 RND3P61587 244 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 VWA1Q6PCB0 445 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 C17orf78Q8N4C9 275 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 GLYATL2Q8WU03 294 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 LINC00052Q96N35 136 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 NARFLQ9H6Q4 476 aa13.35□□□□□ -0.27
MKS1-204ENST00000537529 BARX1Q9HBU1 254 aaPredicted RBP13.35□□□□□ -0.27
MKS1-204ENST00000537529 C3orf85A0A1B0GTC6 90 aa13.34□□□□□ -0.27
MKS1-204ENST00000537529 K7EPK0 472 aa13.34□□□□□ -0.27
MKS1-204ENST00000537529 HS3ST1O14792 307 aa13.34□□□□□ -0.27
MKS1-204ENST00000537529 DEGS1O15121 323 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms