RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 SLC30A7Q8NEW0 376 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 PXT1Q8NFP0 134 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 OPA3Q9H6K4 179 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 CA10Q9NS85 328 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 IL36GQ9NZH8 169 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 SPEF1Q9Y4P9 236 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 NSD1Q96L73 2696 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-208ENST00000537004 IFNA6P05013 189 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 CALCRP30988 508 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 ACTBL2Q562R1 376 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 LAMTOR1Q6IAA8 161 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 Q71RC1 249 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-208ENST00000537004 CSNK2A3Q8NEV1 391 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 MRGPRFQ96AM1 343 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 CITED4Q96RK1 184 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 OBP2BQ9NPH6 170 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 PLEKHJ1Q9NW61 149 aa10.14□□□□□ -0.79
CLIP1-208ENST00000537004 PQLC2LA1A4F0 135 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 OR2AT4A6NND4 320 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 CA11O75493 328 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 CST4P01036 141 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 IGKV3-15P01624 115 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 OR4E1P0C645 316 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 FABP6P51161 128 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 UBE2MP61081 183 aaKnown RBP10.13□□□□□ -0.79
CLIP1-208ENST00000537004 TAF9Q16594 264 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 NKAPLQ5M9Q1 402 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 DTX2Q86UW9 622 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 HOGA1Q86XE5 327 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 CALHM1Q8IU99 346 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 MUC15Q8N387 334 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 C9orf62Q8N4C0 152 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 FTMTQ8N4E7 242 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 OR11H4Q8NGC9 324 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 OR2T35Q8NGX2 323 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 OR51F2Q8NH61 342 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 ZNF431Q8TF32 576 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-208ENST00000537004 ST6GALNAC5Q9BVH7 336 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 CHIAQ9BZP6 476 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 OR51B6Q9H340 312 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 MYOZ1Q9NP98 299 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-208ENST00000537004 MGAT4AQ9UM21 535 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 VSIG4Q9Y279 399 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 HSPB11Q9Y547 144 aa10.13□□□□□ -0.79
CLIP1-208ENST00000537004 CD300LBA8K4G0 201 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 H7C1Q1 480 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 SMAD7O15105 426 aaKnown RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 AKR7A2O43488 359 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 NOS1APO75052 506 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 IGLV1-44P01699 117 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 IGHV4-39P01824 125 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 SFTPBP07988 381 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 ZNF14P17017 642 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 AMY2BP19961 511 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 NAAAQ02083 359 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 TBC1D28Q2M2D7 210 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 CEACAM21Q3KPI0 293 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 PIGYQ3MUY2 71 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 VAX1Q5SQQ9 334 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 VHLLQ6RSH7 139 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 C17orf107Q6ZR85 190 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 SLC25A26Q70HW3 274 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 CCDC36Q8IYA8 594 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 ZDHHC23Q8IYP9 409 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 FBXL14Q8N1E6 418 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 OSR2Q8N2R0 312 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 OR5L1Q8NGL2 311 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 HPSE2Q8WWQ2 592 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 MRPS24Q96EL2 167 aaKnown RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 ZNF230Q9UIE0 474 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 NUP50Q9UKX7 468 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 HSF4Q9ULV5 492 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 GEMIN2O14893 280 aaKnown RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 OR2A4O95047 310 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 GIPP09681 153 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 PAX1P15863 534 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 GPM6AP51674 278 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 SNU13P55769 128 aaKnown RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 SNRPD2P62316 118 aaKnown RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 C11orf71Q6IPW1 123 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 ARRDC1Q8N5I2 433 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 ZDHHC22Q8N966 263 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 ZSCAN4Q8NAM6 433 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 UXS1Q8NBZ7 420 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 MAPK1IP1LQ8NDC0 245 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 BHLHE23Q8NDY6 225 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 OR2AK2Q8NG84 335 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 OR5H2Q8NGV7 314 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 EMG1Q92979 244 aaKnown RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 OR2A7Q96R45 310 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 FGF23Q9GZV9 251 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-208ENST00000537004 PCDHB16Q9NRJ7 776 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 ZNF581Q9P0T4 197 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 PIPOXQ9P0Z9 390 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 NAV3Q8IVL0 2385 aa10.12□□□□□ -0.79
CLIP1-208ENST00000537004 G3V3Q6 166 aa10.11□□□□□ -0.79
CLIP1-208ENST00000537004 H3BUI4 141 aa10.11□□□□□ -0.79
CLIP1-208ENST00000537004 CRYAAP02489 173 aa10.11□□□□□ -0.79
CLIP1-208ENST00000537004 CBR1P16152 277 aa10.11□□□□□ -0.79
CLIP1-208ENST00000537004 TAS2R46P59540 309 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms