RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ST6GAL1P15907 406 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 DYNLT3P51808 116 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 GRB2P62993 217 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 ROM1Q03395 351 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 H1FOOQ8IZA3 346 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 KIR2DL5AQ8N109 375 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 OR5AU1Q8NGC0 362 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 TXNDC17Q9BRA2 123 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 NAA60Q9H7X0 242 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 SLC25A22Q9H936 323 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 DEDDO75618 318 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 AMTP48728 403 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 EWSR1Q01844 656 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 MRPL58Q14197 206 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 OR4A47Q6IF82 309 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 ADAMTSL4Q6UY14 1074 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 BIVMQ86UB2 503 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CA13Q8N1Q1 262 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 OR10J5Q8NHC4 309 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 OR10C1Q96KK4 312 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 PRSS27Q9BQR3 290 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 RNF126Q9BV68 326 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 AURKAIP1Q9NWT8 199 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CTSDP07339 412 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CD99P14209 185 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 PTGER4P35408 488 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 SRP14P37108 136 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 NANOS3P60323 173 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 HERPUD1Q15011 391 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 TIGITQ495A1 244 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 H1FNTQ75WM6 255 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 C6orf201Q7Z4U5 140 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 STARD4Q96DR4 205 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 KIR3DX1Q9H7L2 352 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 HEYLQ9NQ87 328 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 TP53BP1Q12888 1972 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-213ENST00000537002 CRISP2P16562 243 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 PDLIM4P50479 330 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 KCNMB1Q16558 191 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 RPEL1Q2QD12 228 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 PRR27Q6MZM9 219 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 OR10P1Q8NGE3 313 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 PHF7Q9BWX1 381 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-213ENST00000537002 KCNIP2Q9NS61 270 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 TRAV39A0A0B4J263 110 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 C3orf85A0A1B0GTC6 90 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 CEBPBP17676 345 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 RAB7AP51149 207 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 FMODQ06828 376 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 PAQR4Q8N4S7 273 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-213ENST00000537002 MIEN1Q9BRT3 115 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 DNAJB12Q9NXW2 375 aaKnown RBP4.76□□□□□ -1.65
PTPRD-213ENST00000537002 TMEM238LA0A1B0GVL6 79 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 TMEM250H0YL14 139 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 FCER1GP30273 86 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 ACAA2P42765 397 aaKnown RBP4.76□□□□□ -1.65
PTPRD-213ENST00000537002 FZD2Q14332 565 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 SLC39A11Q8N1S5 342 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 FGF14Q92915 247 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 MOB3AQ96BX8 217 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 WDR90Q96KV7 1748 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 TRBV11-1A0A0K0K1C0 115 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 LOC102725191A0A1B0GVB3 256 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 M0R1X1 148 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 ISG15P05161 165 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 UBE2NP61088 152 aaKnown RBP4.76□□□□□ -1.65
PTPRD-213ENST00000537002 MRPL49Q13405 166 aaKnown RBP4.76□□□□□ -1.65
PTPRD-213ENST00000537002 PRSS53Q2L4Q9 553 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 WDR25Q64LD2 544 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-213ENST00000537002 CDC20BQ86Y33 519 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 MSI2Q96DH6 328 aaKnown RBP4.76□□□□□ -1.65
PTPRD-213ENST00000537002 FOXJ2Q9P0K8 574 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 CHEK1O14757 476 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 WDR1O75083 606 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 GYPAP02724 150 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 GZMBP10144 247 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 PPP1CCP36873 323 aaKnown RBP4.76□□□□□ -1.65
PTPRD-213ENST00000537002 DPTQ07507 201 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 Q5PR19 223 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 C9orf50Q5SZB4 431 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 LRTM2Q8N967 370 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 OR1L6Q8NGR2 347 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 CDC42EP3Q9UKI2 254 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 WASHC3Q9Y3C0 194 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 KIR2DS1A0A191URI9 304 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 A6NNC1 897 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 CD160O95971 181 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 CXCL10P02778 98 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 SOD3P08294 240 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 FAHP16930 419 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 CDAP32320 146 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 KIR2DS4P43632 304 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 FHITP49789 147 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 UBE2G1P62253 170 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 KIR2DS1Q14954 304 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 MLF2Q15773 248 aaPredicted RBP4.76□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF738Q8NE65 137 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 FAM173AQ9BQD7 235 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 TXNIPQ9H3M7 391 aa4.76□□□□□ -1.65
PTPRD-213ENST00000537002 LYRM4Q9HD34 91 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms