RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 MRAP2Q96G30 205 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 ZBED3Q96IU2 234 aaPredicted RBP2.89□□□□□ -1.95
PRKDC-208ENST00000536710 ACBD6Q9BR61 282 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 MED10Q9BTT4 135 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 MFSD1Q9H3U5 465 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 CHMP4BQ9H444 224 aaKnown RBP2.89□□□□□ -1.95
PRKDC-208ENST00000536710 SIGLEC1Q9BZZ2 1709 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 AK9Q5TCS8 1911 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 MYBPHLA2RUH7 354 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 ENTPD6O75354 484 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 IGHG2P01859 326 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 ENDOGQ14249 297 aaKnown RBP2.88□□□□□ -1.95
PRKDC-208ENST00000536710 SYCP1Q15431 976 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 GOLGA7BQ2TAP0 167 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 LDLRAD2Q5SZI1 272 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 ZNF470Q6ECI4 717 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 LAMTOR1Q6IAA8 161 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 PAGE2Q7Z2X7 111 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 OTUB2Q96DC9 234 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 OLFM3Q96PB7 478 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 FAAP24Q9BTP7 215 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 FBXL15Q9H469 300 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 ZNF492Q9P255 531 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 TRAPPC1Q9Y5R8 145 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 ADAMTSL3P82987 1691 aa2.88□□□□□ -1.95
PRKDC-208ENST00000536710 C2orf16Q68DN1 1984 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 TRAV8-2A0A0B4J237 113 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 LEUTXA8MZ59 168 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 PDCD6O75340 191 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 FSTL3O95633 263 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 PTHLHP12272 177 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 GTF2F2P13984 249 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 PRPS1L1P21108 318 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 PYCR1P32322 319 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 KLF3P57682 345 aaPredicted RBP2.87□□□□□ -1.95
PRKDC-208ENST00000536710 BAMBIQ13145 260 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 FAM183BPQ6ZVS7 135 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 ACBD4Q8NC06 268 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 OR2M3Q8NG83 312 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 FAM45AQ8TCE6 357 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 OR2V2Q96R30 315 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 RTBDNQ9BSG5 229 aaPredicted RBP2.87□□□□□ -1.95
PRKDC-208ENST00000536710 NDEL1Q9GZM8 345 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 OR52A5Q9H2C5 316 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 TRIM45Q9H8W5 580 aaPredicted RBP2.87□□□□□ -1.95
PRKDC-208ENST00000536710 BTRCQ9Y297 605 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 ICOSQ9Y6W8 199 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 ADGRL1O94910 1474 aa2.87□□□□□ -1.95
PRKDC-208ENST00000536710 COL27A1Q8IZC6 1860 aaPredicted RBP2.87□□□□□ -1.95
PRKDC-208ENST00000536710 A0A1B0GX12 115 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 TRPC5OSA6NMA1 111 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 F5H5P2 479 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 KLHL2O95198 593 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 TRGV3P03979 118 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 ZNF35P13682 527 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 PLTPP55058 493 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 OR10A3P58181 314 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 ZNF660Q6AZW8 331 aaPredicted RBP2.86□□□□□ -1.95
PRKDC-208ENST00000536710 ZFAND6Q6FIF0 208 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 OLIG3Q7RTU3 272 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 TMEM25Q86YD3 366 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 PHF10Q8WUB8 498 aaKnown RBP2.86□□□□□ -1.95
PRKDC-208ENST00000536710 BBS2Q9BXC9 721 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 GABARAPL1Q9H0R8 117 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 TXNIPQ9H3M7 391 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 MS4A12Q9NXJ0 267 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 TAS2R1Q9NYW7 299 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 CD300AQ9UGN4 299 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 POMPQ9Y244 141 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 FADS3Q9Y5Q0 445 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 URGCP-MRPS24S4R325 110 aa2.86□□□□□ -1.95
PRKDC-208ENST00000536710 IGHV3-21A0A0B4J1V1 117 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 IGHV2-26A0A0B4J1V2 119 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 ZNF233A6NK53 670 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 IQCF5A8MTL0 148 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 PSIP1O75475 530 aaKnown RBP2.85□□□□□ -1.95
PRKDC-208ENST00000536710 CA2P00918 260 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 GP1BAP07359 652 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 PMS2P3Q13401 168 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 TMEM215Q68D42 235 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 SSX7Q7RTT5 188 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 MARCH3Q86UD3 253 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 ZFP82Q8N141 532 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 LINC00304Q8N9R0 145 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 ZNF738Q8NE65 137 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 ATP6V1C2Q8NEY4 427 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 ANGPTL6Q8NI99 470 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 PDCD6IPQ8WUM4 868 aaKnown RBP2.85□□□□□ -1.95
PRKDC-208ENST00000536710 DDIT4LQ96D03 193 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 RHOFQ9HBH0 211 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 SPACA1Q9HBV2 294 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 BAZ2AQ9UIF9 1905 aaKnown RBP2.85□□□□□ -1.95
PRKDC-208ENST00000536710 COL4A4P53420 1690 aaPredicted RBP2.85□□□□□ -1.95
PRKDC-208ENST00000536710 NOS1P29475 1434 aa2.85□□□□□ -1.95
PRKDC-208ENST00000536710 IGKV1OR2-108A0A075B7D4 117 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 IGHV3-43A0A0B4J1X8 118 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 IGKV2-24A0A0C4DH68 120 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 FAM183AA6NL82 134 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 ZNF729A6NN14 1252 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms