RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ZNF91Q05481 1191 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 AESQ08117 197 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 KLF10Q13118 480 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 C17orf58Q2M2W7 97 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 LCN1P1Q5VSP4 162 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 SLX4IPQ5VYV7 408 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 TMEM42Q69YG0 159 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 MOB3BQ86TA1 216 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 COMMD2Q86X83 199 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 OR51E1Q8TCB6 317 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 SLAMF9Q96A28 289 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 KIRREL1Q96J84 757 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 TEAD3Q99594 435 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 RASL11BQ9BPW5 248 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 CHCHD6Q9BRQ6 235 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 CADM1Q9BY67 442 aaKnown RBP6.3□□□□□ -1.4
CLIP1-206ENST00000535290 PKIBQ9C010 78 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 PLEKHA3Q9HB20 300 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 CHCHD3Q9NX63 227 aaKnown RBP6.3□□□□□ -1.4
CLIP1-206ENST00000535290 ING3Q9NXR8 418 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 ZNF580Q9UK33 172 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.3□□□□□ -1.4
CLIP1-206ENST00000535290 KLHDC2Q9Y2U9 406 aa6.3□□□□□ -1.4
CLIP1-206ENST00000535290 AMMECR1Q9Y4X0 333 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-206ENST00000535290 IGKV1-27A0A075B6S5 117 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 IGHV1-3A0A0C4DH29 117 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 ODAMA1E959 279 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 ZNF736B4DX44 427 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-206ENST00000535290 SIRPB1O00241 398 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 CXCR6O00574 342 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 RGS11O94810 467 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 IGLV3-1P01715 115 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 LYNP07948 512 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 CALCBP10092 127 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 ATP6V1B1P15313 513 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 PTGFRP43088 359 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 F2RL1P55085 397 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 CLVS2Q5SYC1 327 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 SHFQ7M4L6 423 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 GTSCR1Q86UQ5 136 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 OR8D4Q8NGM9 314 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 OR2T10Q8NGZ9 312 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 CASTOR1Q8WTX7 329 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 THEM6Q8WUY1 208 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 EMG1Q92979 244 aaKnown RBP6.29□□□□□ -1.4
CLIP1-206ENST00000535290 C7orf34Q96L11 122 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 ELOVL1Q9BW60 279 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 CCDC134Q9H6E4 229 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 MED20Q9H944 212 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 SEBOXQ9HB31 216 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-206ENST00000535290 FAM206AQ9NX38 181 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 SIGLEC8Q9NYZ4 499 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 GLS2Q9UI32 602 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 ADAM30Q9UKF2 790 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 PSG11Q9UQ72 335 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 KLK5Q9Y337 293 aaPredicted RBP6.29□□□□□ -1.4
CLIP1-206ENST00000535290 CDH10Q9Y6N8 788 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 FAT2Q9NYQ8 4349 aa6.29□□□□□ -1.4
CLIP1-206ENST00000535290 A0A1W2PPE3 182 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 FAM230AA0A1W2PPH8 454 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 SHISA3A0PJX4 238 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 IZUMO1RA6ND01 250 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 H0Y980 276 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 DLGAP1O14490 977 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 MRASO14807 208 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 DHRS3O75911 302 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 CNIH1O95406 144 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 IGHV3-11P01762 117 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 LGALS1P09382 135 aaKnown RBP6.28□□□□□ -1.4
CLIP1-206ENST00000535290 CGB3P0DN86 165 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 CGB7P0DN87 165 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 SLC2A2P11168 524 aaPredicted RBP6.28□□□□□ -1.4
CLIP1-206ENST00000535290 H2AFXP16104 143 aaPredicted RBP6.28□□□□□ -1.4
CLIP1-206ENST00000535290 NPBWR2P48146 333 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 GNG10P50151 68 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 BLVRAP53004 296 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 SNU13P55769 128 aaKnown RBP6.28□□□□□ -1.4
CLIP1-206ENST00000535290 MFGE8Q08431 387 aaPredicted RBP6.28□□□□□ -1.4
CLIP1-206ENST00000535290 TSPAN31Q12999 210 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 GALEQ14376 348 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 IL34Q6ZMJ4 242 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 SLC25A26Q70HW3 274 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 IZUMO1Q8IYV9 350 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 OR52L1Q8NGH7 329 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 OTOSQ8NHW6 89 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 HAVCR2Q8TDQ0 301 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 TMEM106AQ96A25 262 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 OVOL2Q9BRP0 275 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 PBOV1Q9GZY1 135 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 RBFOX1Q9NWB1 397 aaKnown RBP6.28□□□□□ -1.4
CLIP1-206ENST00000535290 CMTM6Q9NX76 183 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 NKIRAS1Q9NYS0 192 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 ZNF107Q9UII5 783 aaPredicted RBP6.28□□□□□ -1.4
CLIP1-206ENST00000535290 MRPS28Q9Y2Q9 187 aaKnown RBP6.28□□□□□ -1.4
CLIP1-206ENST00000535290 DNAH2Q9P225 4427 aa6.28□□□□□ -1.4
CLIP1-206ENST00000535290 A0A0J9YWU9 116 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 KBTBD11-OT1A0A1B0GTJ5 212 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 TMEM269A0A1B0GVZ9 245 aa6.27□□□□□ -1.41
CLIP1-206ENST00000535290 ZNF729A6NN14 1252 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-206ENST00000535290 HSD17B6O14756 317 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms