RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 PAN3Q58A45 887 aaKnown RBP12.97□□□□□ -0.33
PAX6-230ENST00000534390 LDLRAD3Q86YD5 345 aa12.97□□□□□ -0.33
PAX6-230ENST00000534390 TMEM86BQ8N661 226 aa12.97□□□□□ -0.33
PAX6-230ENST00000534390 C17orf50Q8WW18 174 aa12.97□□□□□ -0.33
PAX6-230ENST00000534390 OR5M11Q96RB7 305 aa12.97□□□□□ -0.33
PAX6-230ENST00000534390 TMED9Q9BVK6 235 aa12.97□□□□□ -0.33
PAX6-230ENST00000534390 SEBOXQ9HB31 216 aaPredicted RBP12.97□□□□□ -0.33
PAX6-230ENST00000534390 ZNRD1Q9P1U0 126 aa12.97□□□□□ -0.33
PAX6-230ENST00000534390 LINC00312Q9Y6C7 94 aa12.97□□□□□ -0.33
PAX6-230ENST00000534390 TRGV10A0A0A0MS01 117 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 A0A0G2JK05 382 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 C17orf98A8MV24 154 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 SLC33A1O00400 549 aaPredicted RBP12.96□□□□□ -0.33
PAX6-230ENST00000534390 ALDOBP05062 364 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 ARG1P05089 322 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 PAX6P26367 422 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 MAPK3P27361 379 aaPredicted RBP12.96□□□□□ -0.33
PAX6-230ENST00000534390 CFPP27918 469 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 DLX6P56179 175 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 SPHARQ15513 63 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 SLC22A6Q4U2R8 563 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 MIDNQ504T8 468 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 KRBOX4Q5JUW0 171 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 Q6P435 159 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 TCF23Q7RTU1 214 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 C11orf42Q8N5U0 333 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 CHST4Q8NCG5 386 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 OR13D1Q8NGV5 346 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 DERL3Q96Q80 235 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 CDCA4Q9BXL8 241 aa12.96□□□□□ -0.33
PAX6-230ENST00000534390 TRBV5-7A0A0A0MS05 114 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 GPR137BO60478 399 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 CLPXO76031 633 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 IGHV1-8P0DP01 117 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 IGFBP3P17936 291 aaPredicted RBP12.95□□□□□ -0.34
PAX6-230ENST00000534390 FSTP19883 344 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 GLIPR1P48060 266 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 COMPP49747 757 aaPredicted RBP12.95□□□□□ -0.34
PAX6-230ENST00000534390 SLC35A2P78381 396 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 BDH1Q02338 343 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 PLA1AQ53H76 456 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 PRAMEF5Q5TYX0 476 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 ELP2Q6IA86 826 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 MUL1Q969V5 352 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 GAL3ST2Q9H3Q3 398 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 MRPS28Q9Y2Q9 187 aaKnown RBP12.95□□□□□ -0.34
PAX6-230ENST00000534390 DSCAML1Q8TD84 2053 aa12.95□□□□□ -0.34
PAX6-230ENST00000534390 ODAMA1E959 279 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 H3BUX3 64 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 RBP4P02753 201 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 MDKP21741 143 aaPredicted RBP12.94□□□□□ -0.34
PAX6-230ENST00000534390 ERP29P30040 261 aaKnown RBP12.94□□□□□ -0.34
PAX6-230ENST00000534390 VHLP40337 213 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 GLP1RP43220 463 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 RAG2P55895 527 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 IL13RA2Q14627 380 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 INSL4Q14641 139 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 TAF9Q16594 264 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 RNLSQ5VYX0 342 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 AWAT2Q6E213 333 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 OSR2Q8N2R0 312 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 DYRK2Q92630 601 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 THRSPQ92748 146 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 UFD1Q92890 307 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 PPIL3Q9H2H8 161 aaKnown RBP12.94□□□□□ -0.34
PAX6-230ENST00000534390 VPREB3Q9UKI3 123 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 ST3GAL6Q9Y274 331 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 UBE2J1Q9Y385 318 aaPredicted RBP12.94□□□□□ -0.34
PAX6-230ENST00000534390 SESN1Q9Y6P5 492 aa12.94□□□□□ -0.34
PAX6-230ENST00000534390 FAM172BPA6NC97 362 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 OR7C1O76099 320 aaPredicted RBP12.93□□□□□ -0.34
PAX6-230ENST00000534390 CD1AP06126 327 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 CRHBPP24387 322 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 LMO1P25800 156 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 MAP2K4P45985 399 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 RBM11P57052 281 aaKnown RBP12.93□□□□□ -0.34
PAX6-230ENST00000534390 LY6EQ16553 131 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 ACSM3Q53FZ2 586 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 RBM48Q5RL73 367 aaKnown RBP12.93□□□□□ -0.34
PAX6-230ENST00000534390 ATAD3CQ5T2N8 411 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 LIPKQ5VXJ0 399 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 DHRS7BQ6IAN0 325 aaPredicted RBP12.93□□□□□ -0.34
PAX6-230ENST00000534390 GLIPR1L1Q6UWM5 242 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 GDPGP1Q6ZNW5 385 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 LHFPL4Q7Z7J7 247 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 BEND2Q8NDZ0 799 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 NEK7Q8TDX7 302 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 TMEM203Q969S6 136 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 SSX3Q99909 188 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 TCF7L1Q9HCS4 588 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 PCDHB16Q9NRJ7 776 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 BLOC1S6Q9UL45 172 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 FOXJ3Q9UPW0 622 aa12.93□□□□□ -0.34
PAX6-230ENST00000534390 LSM2Q9Y333 95 aaKnown RBP12.93□□□□□ -0.34
PAX6-230ENST00000534390 MEIKINA0A087WXM9 373 aa12.92□□□□□ -0.34
PAX6-230ENST00000534390 TRAV24A0A0B4J272 114 aa12.92□□□□□ -0.34
PAX6-230ENST00000534390 A0A1W2PP11 408 aa12.92□□□□□ -0.34
PAX6-230ENST00000534390 PIN1P1O15428 100 aa12.92□□□□□ -0.34
PAX6-230ENST00000534390 GPX5O75715 221 aa12.92□□□□□ -0.34
PAX6-230ENST00000534390 CSN2P05814 226 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms