RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 MTNR1BP49286 362 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 DYNLT3P51808 116 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 KRBOX4Q5JUW0 171 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 PRAMEF5Q5TYX0 476 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 LPCAT4Q643R3 524 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 HEPN1Q6WQI6 88 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 RTN4RL2Q86UN3 420 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 SATL1Q86VE3 508 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 ABHD12Q8N2K0 398 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 ZNF596Q8TC21 504 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 APH1BQ8WW43 257 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 CORO2AQ92828 525 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 RDH12Q96NR8 316 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 NR1H4Q96RI1 486 aaPredicted RBP12.45□□□□□ -0.42
CPSF1-211ENST00000533492 PRSS22Q9GZN4 317 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 FGF20Q9NP95 211 aaPredicted RBP12.45□□□□□ -0.42
CPSF1-211ENST00000533492 ODAMA1E959 279 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 CSN2P05814 226 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 CD2P06729 351 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 LIMS3P0CW19 117 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 LIMS4P0CW20 117 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 GTF2A1P52655 376 aaPredicted RBP12.44□□□□□ -0.42
CPSF1-211ENST00000533492 ZP1P60852 638 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 HABP2Q14520 560 aaPredicted RBP12.44□□□□□ -0.42
CPSF1-211ENST00000533492 SMN1Q16637 294 aaKnown RBP12.44□□□□□ -0.42
CPSF1-211ENST00000533492 ZSCAN26Q16670 478 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 Q6P435 159 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 RPL22L1Q6P5R6 122 aaKnown RBP12.44□□□□□ -0.42
CPSF1-211ENST00000533492 TMPRSS11AQ6ZMR5 421 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 OR4D6Q8NGJ1 314 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 GPR148Q8TDV2 347 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 ZNF702PQ9H963 129 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 DPM3Q9P2X0 92 aa12.44□□□□□ -0.42
CPSF1-211ENST00000533492 IRGMA1A4Y4 181 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 MEGF11A6BM72 1044 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 SLC33A1O00400 549 aaPredicted RBP12.43□□□□□ -0.42
CPSF1-211ENST00000533492 TOR1AO14656 332 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 JUNBP17275 347 aaPredicted RBP12.43□□□□□ -0.42
CPSF1-211ENST00000533492 DCKP27707 260 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 BRS3P32247 399 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 PTGFRP43088 359 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 ARHGDIBP52566 201 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 ATXN7L3Q14CW9 347 aaPredicted RBP12.43□□□□□ -0.42
CPSF1-211ENST00000533492 CCDC58Q4VC31 144 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 PXT1Q8NFP0 134 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 OR4P4Q8NGL7 312 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 TNFAIP8L1Q8WVP5 186 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 CAPSLQ8WWF8 208 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 CFHR4Q92496 578 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 JAM3Q9BX67 310 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 FAM192AQ9GZU8 254 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 OR6C3Q9NZP0 311 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 NOTCH1P46531 2555 aa12.43□□□□□ -0.42
CPSF1-211ENST00000533492 FAM172BPA6NC97 362 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 ZNF729A6NN14 1252 aaPredicted RBP12.42□□□□□ -0.42
CPSF1-211ENST00000533492 LEUTXA8MZ59 168 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 H0YJX3 145 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 HSPB6O14558 160 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 FBXO24O75426 580 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 WBP4O75554 376 aaKnown RBP12.42□□□□□ -0.42
CPSF1-211ENST00000533492 MYL12AP19105 171 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 ETV1P50549 477 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 PRRX1P54821 245 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 BDH1Q02338 343 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 CDK5R1Q15078 307 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 RSU1Q15404 277 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 LRRC36Q1X8D7 754 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 PAN3Q58A45 887 aaKnown RBP12.42□□□□□ -0.42
CPSF1-211ENST00000533492 HIST2H2BDQ6DRA6 164 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 ELP2Q6IA86 826 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 BAIAP2L2Q6UXY1 529 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 Q8N2B8 174 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 ZNF565Q8N9K5 539 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 OR51A2Q8NGJ7 313 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 CREB3L1Q96BA8 519 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 COQ2Q96H96 371 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 OR5M11Q96RB7 305 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 BARHL1Q9BZE3 327 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 SERTAD4Q9NUC0 356 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 CHCHD3Q9NX63 227 aaKnown RBP12.42□□□□□ -0.42
CPSF1-211ENST00000533492 TAS2R4Q9NYW5 299 aa12.42□□□□□ -0.42
CPSF1-211ENST00000533492 FAM90A22PA8MWA6 464 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 GABRPO00591 440 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 HTR3BO95264 441 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 CLIC3O95833 236 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 ALDOBP05062 364 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 NFYBP25208 207 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 CEACAM3P40198 252 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 BLCAPP62952 87 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 PPP3R1P63098 170 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 MED21Q13503 144 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 OR2G6Q5TZ20 316 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 TTC23Q5W5X9 447 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 C1QL4Q86Z23 238 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 OR10K1Q8NGX5 313 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 CNIH3Q8TBE1 160 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 CYGBQ8WWM9 190 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 TMEM106AQ96A25 262 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 AKR1E2Q96JD6 320 aa12.41□□□□□ -0.42
CPSF1-211ENST00000533492 S100A13Q99584 98 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms