RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 FAM27D1Q5T7N8 215 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 TPRX1Q8N7U7 411 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 NKAIN3Q8N8D7 197 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 MGLLQ99685 303 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 ING4Q9UNL4 249 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 hCG_1809904A0A1W2PP81 198 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 A0A1W2PPE2 198 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 A0A1W2PR64 198 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 A0A1W2PRV1 198 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 DEGS1O15121 323 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 ZNF780AO75290 641 aaPredicted RBP16.7■□□□□ 0.26
CCS-208ENST00000533244 HTR3BO95264 441 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 RNASE1P07998 156 aaKnown RBP16.7■□□□□ 0.26
CCS-208ENST00000533244 EEF1B2P24534 225 aaKnown RBP16.7■□□□□ 0.26
CCS-208ENST00000533244 ERVFRD-1P60508 538 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 PIGYQ3MUY2 71 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 LDLRAD3Q86YD5 345 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 PNKDQ8N490 385 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 PHYHIPQ92561 330 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 DUX5Q96PT3 197 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 PPIL3Q9H2H8 161 aaKnown RBP16.7■□□□□ 0.26
CCS-208ENST00000533244 PPA2Q9H2U2 334 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 IFT22Q9H7X7 185 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 ACOT13Q9NPJ3 140 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 SF3B6Q9Y3B4 125 aaKnown RBP16.7■□□□□ 0.26
CCS-208ENST00000533244 TRAV24A0A0B4J272 114 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 MELTFP08582 738 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 UCHL1P09936 223 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 HSMCR30P0CW71 290 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 RBM11P57052 281 aaKnown RBP16.69■□□□□ 0.26
CCS-208ENST00000533244 SCN1BQ07699 218 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 ZNF367Q7RTV3 350 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 LRRTM1Q86UE6 522 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 OSR2Q8N2R0 312 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 JAGN1Q8N5M9 183 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 MUL1Q969V5 352 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 ZDHHC16Q969W1 377 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 COQ2Q96H96 371 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 ZNF714Q96N38 554 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 NR1H4Q96RI1 486 aaPredicted RBP16.69■□□□□ 0.26
CCS-208ENST00000533244 YTHDF1Q9BYJ9 559 aaKnown RBP16.69■□□□□ 0.26
CCS-208ENST00000533244 HEXA-AS1Q9H8Q6 139 aa16.69■□□□□ 0.26
CCS-208ENST00000533244 MRPS28Q9Y2Q9 187 aaKnown RBP16.69■□□□□ 0.26
CCS-208ENST00000533244 ANK2Q01484 3957 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 MEX3AA1L020 520 aaKnown RBP16.68■□□□□ 0.26
CCS-208ENST00000533244 MEGF11A6BM72 1044 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 HOXA3O43365 443 aaPredicted RBP16.68■□□□□ 0.26
CCS-208ENST00000533244 CD37P11049 281 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 PSMA1P25786 263 aaKnown RBP16.68■□□□□ 0.26
CCS-208ENST00000533244 SAA4P35542 130 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 RPS25P62851 125 aaKnown RBP16.68■□□□□ 0.26
CCS-208ENST00000533244 PAX5Q02548 391 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 TRAM1Q15629 374 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 TMEM91Q6ZNR0 172 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 CEACAM19Q7Z692 300 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 TMEM86BQ8N661 226 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 OR4D6Q8NGJ1 314 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 CORO2AQ92828 525 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 S100A13Q99584 98 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 UQCC2Q9BRT2 126 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 ST3GAL6Q9Y274 331 aa16.68■□□□□ 0.26
CCS-208ENST00000533244 UBE2J1Q9Y385 318 aaPredicted RBP16.68■□□□□ 0.26
CCS-208ENST00000533244 A0A1W2PP11 408 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 A0A1W2PRD5 423 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 A0A1W2PRF3 423 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 A0A1W2PRM7 423 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 FUOMA2VDF0 154 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 CSTBP04080 98 aaKnown RBP16.67■□□□□ 0.26
CCS-208ENST00000533244 IGHV1-8P0DP01 117 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 SERPINA2P20848 420 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 GLIPR1P48060 266 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 EMX1Q04741 257 aaPredicted RBP16.67■□□□□ 0.26
CCS-208ENST00000533244 AESQ08117 197 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 GPR176Q14439 515 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 MIDNQ504T8 468 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 LINC00596Q86U02 117 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 TMEM203Q969S6 136 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 SLC25A28Q96A46 364 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 AJUBAQ96IF1 538 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 TCF7L1Q9HCS4 588 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 PCDHB16Q9NRJ7 776 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 ZNF581Q9P0T4 197 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 ZNRD1Q9P1U0 126 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 POMT1Q9Y6A1 747 aa16.67■□□□□ 0.26
CCS-208ENST00000533244 TMEM89A2RUT3 159 aa16.66■□□□□ 0.26
CCS-208ENST00000533244 FBP1P09467 338 aa16.66■□□□□ 0.26
CCS-208ENST00000533244 GTF2F2P13984 249 aa16.66■□□□□ 0.26
CCS-208ENST00000533244 GABRA5P31644 462 aa16.66■□□□□ 0.26
CCS-208ENST00000533244 MPV17LQ2QL34 196 aa16.66■□□□□ 0.26
CCS-208ENST00000533244 SLC22A6Q4U2R8 563 aa16.66■□□□□ 0.26
CCS-208ENST00000533244 HSD17B12Q53GQ0 312 aa16.66■□□□□ 0.26
CCS-208ENST00000533244 GLIPR1L1Q6UWM5 242 aa16.66■□□□□ 0.26
CCS-208ENST00000533244 ZNF782Q6ZMW2 699 aaPredicted RBP16.66■□□□□ 0.26
CCS-208ENST00000533244 SSMEM1Q8WWF3 244 aa16.66■□□□□ 0.26
CCS-208ENST00000533244 MRPS24Q96EL2 167 aaKnown RBP16.66■□□□□ 0.26
CCS-208ENST00000533244 NCOR1P1Q9H4R4 102 aa16.66■□□□□ 0.26
CCS-208ENST00000533244 ODAMA1E959 279 aa16.65■□□□□ 0.26
CCS-208ENST00000533244 MEIOCA2RUB1 952 aa16.65■□□□□ 0.26
CCS-208ENST00000533244 GEMIN2O14893 280 aaKnown RBP16.65■□□□□ 0.26
CCS-208ENST00000533244 SRMP19623 302 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms