RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 HEXA-AS1Q9H8Q6 139 aa17.99■□□□□ 0.47
PTPRK-222ENST00000532751 ACOT13Q9NPJ3 140 aa17.99■□□□□ 0.47
PTPRK-222ENST00000532751 ESM1Q9NQ30 184 aa17.99■□□□□ 0.47
PTPRK-222ENST00000532751 MRPS28Q9Y2Q9 187 aaKnown RBP17.99■□□□□ 0.47
PTPRK-222ENST00000532751 SF3B6Q9Y3B4 125 aaKnown RBP17.99■□□□□ 0.47
PTPRK-222ENST00000532751 SLC33A1O00400 549 aaPredicted RBP17.98■□□□□ 0.47
PTPRK-222ENST00000532751 SC5DO75845 299 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 ZNF728P0DKX0 622 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 DLX1P56177 255 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 P2RX3P56373 397 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 ERVFRD-1P60508 538 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 AWAT2Q6E213 333 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 TPRX1Q8N7U7 411 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 FAM216AQ8WUB2 273 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 PHYHIPQ92561 330 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 TMEM203Q969S6 136 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 FOXRED1Q96CU9 486 aaPredicted RBP17.98■□□□□ 0.47
PTPRK-222ENST00000532751 ZNF714Q96N38 554 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 UQCC2Q9BRT2 126 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 PRDM13Q9H4Q3 707 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 ST3GAL6Q9Y274 331 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 LINC00312Q9Y6C7 94 aa17.98■□□□□ 0.47
PTPRK-222ENST00000532751 MDFIC2A0A1B0GVS7 189 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 DNAJC9-AS1A6NH13 148 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 C17orf98A8MV24 154 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 NPFFO15130 113 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 RBP4P02753 201 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 CSN2P05814 226 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 GTF2F2P13984 249 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 RPS25P62851 125 aaKnown RBP17.97■□□□□ 0.47
PTPRK-222ENST00000532751 UBA52P62987 128 aaKnown RBP17.97■□□□□ 0.47
PTPRK-222ENST00000532751 PRB3Q04118 309 aaPredicted RBP17.97■□□□□ 0.47
PTPRK-222ENST00000532751 PIGYQ3MUY2 71 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 SLC22A6Q4U2R8 563 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 PAN3Q58A45 887 aaKnown RBP17.97■□□□□ 0.47
PTPRK-222ENST00000532751 NHLRC3Q5JS37 347 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 GLT8D1Q68CQ7 371 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 GLIPR1L1Q6UWM5 242 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 TRAPPC6BQ86SZ2 158 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 LINC00596Q86U02 117 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 FAM96BQ9Y3D0 163 aa17.97■□□□□ 0.47
PTPRK-222ENST00000532751 FBN1P35555 2871 aaKnown RBP17.97■□□□□ 0.47
PTPRK-222ENST00000532751 A0A1W2PRD5 423 aa17.96■□□□□ 0.47
PTPRK-222ENST00000532751 A0A1W2PRF3 423 aa17.96■□□□□ 0.47
PTPRK-222ENST00000532751 A0A1W2PRM7 423 aa17.96■□□□□ 0.47
PTPRK-222ENST00000532751 UCHL1P09936 223 aa17.96■□□□□ 0.47
PTPRK-222ENST00000532751 SRMP19623 302 aa17.96■□□□□ 0.47
PTPRK-222ENST00000532751 RBM11P57052 281 aaKnown RBP17.96■□□□□ 0.47
PTPRK-222ENST00000532751 EMX1Q04741 257 aaPredicted RBP17.96■□□□□ 0.47
PTPRK-222ENST00000532751 FAM27D1Q5T7N8 215 aa17.96■□□□□ 0.47
PTPRK-222ENST00000532751 Q6YL49 198 aa17.96■□□□□ 0.47
PTPRK-222ENST00000532751 C11orf42Q8N5U0 333 aa17.96■□□□□ 0.47
PTPRK-222ENST00000532751 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.96■□□□□ 0.47
PTPRK-222ENST00000532751 SPATA3Q8NHX4 192 aa17.96■□□□□ 0.47
PTPRK-222ENST00000532751 UBE2J1Q9Y385 318 aaPredicted RBP17.96■□□□□ 0.47
PTPRK-222ENST00000532751 LRRC42Q9Y546 428 aa17.96■□□□□ 0.47
PTPRK-222ENST00000532751 COL6A5A8TX70 2615 aa17.96■□□□□ 0.47
PTPRK-222ENST00000532751 KIAA2026Q5HYC2 2103 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 TRGV10A0A0A0MS01 117 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 A0A0U1RQK1 487 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 CLDN34H7C241 214 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 ARL6IP5O75915 188 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 GABRA5P31644 462 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 KCNJ3P48549 501 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 DLX6P56179 175 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 AESQ08117 197 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 MPV17LQ2QL34 196 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 KRBOX4Q5JUW0 171 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 PIP4P2Q8N4L2 257 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 SLC25A28Q96A46 364 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 DUX5Q96PT3 197 aa17.95■□□□□ 0.46
PTPRK-222ENST00000532751 TRAV24A0A0B4J272 114 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 MEX3AA1L020 520 aaKnown RBP17.94■□□□□ 0.46
PTPRK-222ENST00000532751 MEIOCA2RUB1 952 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 HOXA3O43365 443 aaPredicted RBP17.94■□□□□ 0.46
PTPRK-222ENST00000532751 OR7C1O76099 320 aaPredicted RBP17.94■□□□□ 0.46
PTPRK-222ENST00000532751 FBP1P09467 338 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 GP2P55259 537 aaKnown RBP17.94■□□□□ 0.46
PTPRK-222ENST00000532751 ACTG1P63261 375 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 ATXN7L3Q14CW9 347 aaPredicted RBP17.94■□□□□ 0.46
PTPRK-222ENST00000532751 SLC9A3R2Q15599 337 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 ZNF782Q6ZMW2 699 aaPredicted RBP17.94■□□□□ 0.46
PTPRK-222ENST00000532751 TCF23Q7RTU1 214 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 LYPD6Q86Y78 171 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 OR4D6Q8NGJ1 314 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 MRPS24Q96EL2 167 aaKnown RBP17.94■□□□□ 0.46
PTPRK-222ENST00000532751 BARHL1Q9BZE3 327 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 GAL3ST2Q9H3Q3 398 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 ING3Q9NXR8 418 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 GHRLQ9UBU3 117 aa17.94■□□□□ 0.46
PTPRK-222ENST00000532751 HSPB6O14558 160 aa17.93■□□□□ 0.46
PTPRK-222ENST00000532751 GEMIN2O14893 280 aaKnown RBP17.93■□□□□ 0.46
PTPRK-222ENST00000532751 RRP9O43818 475 aaKnown RBP17.93■□□□□ 0.46
PTPRK-222ENST00000532751 PAHP00439 452 aa17.93■□□□□ 0.46
PTPRK-222ENST00000532751 MELTFP08582 738 aa17.93■□□□□ 0.46
PTPRK-222ENST00000532751 IGHV1-8P0DP01 117 aa17.93■□□□□ 0.46
PTPRK-222ENST00000532751 COX7A1P24310 79 aa17.93■□□□□ 0.46
PTPRK-222ENST00000532751 GLIPR1P48060 266 aa17.93■□□□□ 0.46
PTPRK-222ENST00000532751 MIDNQ504T8 468 aa17.93■□□□□ 0.46
PTPRK-222ENST00000532751 HCP5Q6MZN7 132 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms