RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CACNG5Q9UF02 275 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 TINAGQ9UJW2 476 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 IGHV3OR15-7A0A075B7D8 119 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 CSF2RBP32927 897 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 ERVFC1-1P60608 527 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 CCDC144NLQ6NUI1 221 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 TGIF2LYQ8IUE0 185 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 TGIF2LXQ8IUE1 241 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 NECAP1Q8NC96 275 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 HAND1O96004 215 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 SLC25A5P05141 298 aaKnown RBP13□□□□□ -0.33
PCDHA9-202ENST00000532602 ADRB1P08588 477 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 ONECUT2O95948 504 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 IGHA1P01876 353 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 FFAR4Q5NUL3 377 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 ZBTB37Q5TC79 503 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 BCL3P20749 454 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 CCDC190Q86UF4 302 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 OR10AC1Q8NH08 325 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 ZNF716A6NP11 495 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 GPR6P46095 362 aaPredicted RBP12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 P2RY6Q15077 328 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 INPP5JQ15735 1006 aaPredicted RBP12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 MPV17LQ2QL34 196 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 SLC16A12Q6ZSM3 486 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 DOLPP1Q86YN1 238 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 TMEM38BQ9NVV0 291 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 OR1A1Q9P1Q5 309 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 CDIPTO14735 213 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 SEMA7AO75326 666 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 OPN1MWP04001 364 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 OPN1MW2P0DN77 364 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 OPN1MW3P0DN78 364 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 PRF1P14222 555 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 LTBP1Q14766 1721 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 ATP5SQ99766 215 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 LPAR2Q9HBW0 351 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 CRYBB2P43320 205 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 SURF2Q15527 256 aaPredicted RBP12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 MUC20Q8N307 709 aaPredicted RBP12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 ZDHHC11Q9H8X9 412 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 COA4Q9NYJ1 87 aa12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 PDCD11Q14690 1871 aaKnown RBP12.99□□□□□ -0.33
PCDHA9-202ENST00000532602 TRDCB7Z8K6 153 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 LRRTM1Q86UE6 522 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 SLC52A3Q9NQ40 469 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 MRM2Q9UI43 246 aaKnown RBP12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 TRIM77I1YAP6 450 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 GZMKP49863 264 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 RAG2P55895 527 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 OR5A2Q8NGI9 324 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 OPN3Q9H1Y3 402 aaPredicted RBP12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 AKIP1Q9NQ31 210 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 GPR27Q9NS67 375 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 A0A1W2PPQ1 181 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 NPIPB8E9PQR5 432 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 TOX4O94842 621 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 IL13RA2Q14627 380 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 GPR137Q96N19 417 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 ZNF320A2RRD8 509 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 FA2HQ7L5A8 372 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 PSME4Q14997 1843 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 MYOFQ9NZM1 2061 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 CLEC2AQ6UVW9 174 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 SPAG17Q6Q759 2223 aa12.98□□□□□ -0.33
PCDHA9-202ENST00000532602 OR2J3O76001 311 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 TMPRSS5Q9H3S3 457 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 TMEM231Q9H6L2 316 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 INSIG2Q9Y5U4 225 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 F5H697 171 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 GNG7O60262 68 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 ZNF385AQ96PM9 386 aaKnown RBP12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 WDR13Q9H1Z4 485 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 AHRRA9YTQ3 701 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 SSX1Q16384 188 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 CTF1Q16619 201 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 RELL2Q8NC24 303 aaPredicted RBP12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 SLC24A4Q8NFF2 622 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 WDFY2Q96P53 400 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 RAB33BQ9H082 229 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 SH2D2AQ9NP31 389 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 LOC285556D6RIA3 1793 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 BGLAPP02818 100 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 PRSS53Q2L4Q9 553 aa12.97□□□□□ -0.33
PCDHA9-202ENST00000532602 CD200P41217 278 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 GVQW1Q8N7I0 195 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 R3HDM4Q96D70 268 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 CTSDP07339 412 aaPredicted RBP12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 DHRS2Q13268 280 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 C19orf35Q6ZS72 473 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 LINC00596Q86U02 117 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 WDR31Q8NA23 367 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 TMUB1Q9BVT8 246 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 ANXA10Q9UJ72 324 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 GREB1LQ9C091 1923 aaPredicted RBP12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 HSBP1O75506 76 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 LYZP61626 148 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 GABRA6Q16445 453 aa12.96□□□□□ -0.33
PCDHA9-202ENST00000532602 OR5C1Q8NGR4 320 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms