RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 AGAP6Q5VW22 663 aa18.42■□□□□ 0.54
PACSIN3-209ENST00000532457 C11orf71Q6IPW1 123 aa18.42■□□□□ 0.54
PACSIN3-209ENST00000532457 CMSS1Q9BQ75 279 aaKnown RBP18.42■□□□□ 0.54
PACSIN3-209ENST00000532457 DPCDQ9BVM2 203 aaPredicted RBP18.42■□□□□ 0.54
PACSIN3-209ENST00000532457 MMP28Q9H239 520 aa18.42■□□□□ 0.54
PACSIN3-209ENST00000532457 RASL12Q9NYN1 266 aa18.42■□□□□ 0.54
PACSIN3-209ENST00000532457 APCP25054 2843 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 M0QYG6 137 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 SH2D1BO14796 132 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 CSF1P09603 554 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 SLC6A1P30531 599 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 RCVRNP35243 200 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 CCR6P51684 374 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 ACTBP60709 375 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 ACTG1P63261 375 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 TESK1Q15569 626 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 CD177Q8N6Q3 437 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 MINDY2Q8NBR6 621 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 OR4C16Q8NGL9 310 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 ERGIC1Q969X5 290 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 TINAGL1Q9GZM7 467 aaPredicted RBP18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 SAP30LQ9HAJ7 183 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 NLKQ9UBE8 527 aa18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 FLNBO75369 2602 aaKnown RBP18.41■□□□□ 0.54
PACSIN3-209ENST00000532457 hCG_2014768A0A024R1R8 64 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 PSPNO60542 156 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 KNG1P01042 644 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 PSG2P11465 335 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 TNFRSF1AP19438 455 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 CD80P33681 288 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 PLA1AQ53H76 456 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 STEAP1BQ6NZ63 245 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 MZT2BQ6NZ67 158 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 HOGA1Q86XE5 327 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 VRK1Q99986 396 aaPredicted RBP18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 EGLN1Q9GZT9 426 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 IFT46Q9NQC8 304 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 TAS2R8Q9NYW2 309 aa18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 FBXO9Q9UK97 447 aaPredicted RBP18.4■□□□□ 0.54
PACSIN3-209ENST00000532457 IGKV1D-17A0A075B6S4 117 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 MCRIP1C9JLW8 97 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 CD74P04233 296 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 LMO1P25800 156 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 GIFP27352 417 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 AP3S2P59780 193 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 SNRPD2P62316 118 aaKnown RBP18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 SMIM21Q3B7S5 101 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 C5orf24Q7Z6I8 188 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 DUSP18Q8NEJ0 188 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 OR56B4Q8NH76 319 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 CBLN4Q9NTU7 201 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 WIPI2Q9Y4P8 454 aa18.39■□□□□ 0.54
PACSIN3-209ENST00000532457 AMY2BP19961 511 aa18.39■□□□□ 0.53
PACSIN3-209ENST00000532457 PLEKHA6Q9Y2H5 1048 aa18.39■□□□□ 0.53
PACSIN3-209ENST00000532457 ABCA12Q86UK0 2595 aa18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 FAM240BA0A1B0GVZ2 78 aa18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 OR2AT4A6NND4 320 aa18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 ZNF736B4DX44 427 aaPredicted RBP18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 FCGR3AP08637 254 aa18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 ZNF735P0CB33 412 aa18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 AKAIN1P0CW23 69 aa18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 PRDX2P32119 198 aa18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 TAS2R19P59542 299 aa18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 PLPPR1Q8TBJ4 325 aa18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 C7orf50Q9BRJ6 194 aaKnown RBP18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 SPACA1Q9HBV2 294 aa18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 ZNF107Q9UII5 783 aaPredicted RBP18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 LAMP3Q9UQV4 416 aa18.38■□□□□ 0.53
PACSIN3-209ENST00000532457 TMEM82A0PJX8 343 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 CENPXA8MT69 81 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 NAPSAO96009 420 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 PMP2P02689 132 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 CBX5P45973 191 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 COL10A1Q03692 680 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 MICBQ29980 383 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 PAN3Q58A45 887 aaKnown RBP18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 DTX2Q86UW9 622 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 BEST4Q8NFU0 473 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 CCL17Q92583 94 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 CACNG6Q9BXT2 260 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 ZNF701Q9NV72 531 aaPredicted RBP18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 MCUBQ9NWR8 336 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 NPTNQ9Y639 398 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 DSCAMO60469 2012 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 LYNX1G3V0Z9 82 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 RAB3DO95716 219 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 GLAP06280 429 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 LYNX1P0DP58 116 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 HRH1P35367 487 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 PPOXP50336 477 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 FIP1L1Q6UN15 594 aaKnown RBP18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 C17orf107Q6ZR85 190 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 FAM90A1Q86YD7 464 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 DEFB108BQ8NET1 73 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 OR11L1Q8NGX0 322 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 OR4K15Q8NH41 348 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 SLC6A7Q99884 636 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 TRAF4Q9BUZ4 470 aaPredicted RBP18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 CHST6Q9GZX3 395 aa18.37■□□□□ 0.53
PACSIN3-209ENST00000532457 PPA2Q9H2U2 334 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms