RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 LINC01587Q99440 93 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 UPF3BQ9BZI7 483 aaKnown RBP1.68□□□□□ -2.14
CD44-234ENST00000531873 API5Q9BZZ5 524 aaKnown RBP1.68□□□□□ -2.14
CD44-234ENST00000531873 ZNF436Q9C0F3 470 aaPredicted RBP1.68□□□□□ -2.14
CD44-234ENST00000531873 NDEL1Q9GZM8 345 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 FBXL15Q9H469 300 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 DHX35Q9H5Z1 703 aaKnown RBP1.68□□□□□ -2.14
CD44-234ENST00000531873 FAM60AQ9NP50 221 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 DIABLOQ9NR28 239 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 KIAA0232Q92628 1395 aa1.68□□□□□ -2.14
CD44-234ENST00000531873 PTPRKQ15262 1439 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 GOLGA8IPA6NC78 632 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 PGPA6NDG6 321 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 C9JQL5 133 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 C8orf87E5RJ46 101 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 PRAMEF26H0Y7S4 382 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 K7EPK0 472 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 CRXO43186 299 aaPredicted RBP1.67□□□□□ -2.14
CD44-234ENST00000531873 ADAP1O75689 374 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 YEATS4O95619 227 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 SNAP29O95721 258 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 EPPINO95925 133 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 CXorf1O96002 111 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 IMPA1P29218 277 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 SLC6A1P30531 599 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 MPIP34949 423 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 CCL23P55773 120 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 MAP3K7CLP57077 242 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 UBE2G2P60604 165 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 HBG1P69891 147 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 HBG2P69892 147 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 FUT5Q11128 374 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 EIF4EBP2Q13542 120 aaPredicted RBP1.67□□□□□ -2.14
CD44-234ENST00000531873 LY6EQ16553 131 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 KRTAP13-2Q52LG2 175 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 LAMTOR1Q6IAA8 161 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 SLC25A34Q6PIV7 304 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 FAM131AQ6UXB0 335 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 DGAT2L6Q6ZPD8 337 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 FAM183BPQ6ZVS7 135 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 USP50Q70EL3 339 aaPredicted RBP1.67□□□□□ -2.14
CD44-234ENST00000531873 TRMT10CQ7L0Y3 403 aaKnown RBP1.67□□□□□ -2.14
CD44-234ENST00000531873 FA2HQ7L5A8 372 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 SSX7Q7RTT5 188 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 DAZ4Q86SG3 579 aaKnown RBP1.67□□□□□ -2.14
CD44-234ENST00000531873 HMGN2P46Q86SG4 172 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 MARCH3Q86UD3 253 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 NT5DC3Q86UY8 548 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 SPATA24Q86W54 205 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 GATD1Q8NB37 220 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 OR2M3Q8NG83 312 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 OR6K3Q8NGY3 331 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 DYNC2LI1Q8TCX1 351 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 ITLN2Q8WWU7 325 aaPredicted RBP1.67□□□□□ -2.14
CD44-234ENST00000531873 LRRC45Q96CN5 670 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 ZNF514Q96K75 400 aaPredicted RBP1.67□□□□□ -2.14
CD44-234ENST00000531873 PPP1R36Q96LQ0 422 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 LINC00477Q96M19 166 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 TMEM56Q96MV1 263 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 PITX2Q99697 317 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 TAPBPLQ9BX59 468 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 SLC25A31Q9H0C2 315 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 OR51E2Q9H255 320 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 DSN1Q9H410 356 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 DAZ1Q9NQZ3 744 aaKnown RBP1.67□□□□□ -2.14
CD44-234ENST00000531873 ZNHIT6Q9NWK9 470 aaKnown RBP1.67□□□□□ -2.14
CD44-234ENST00000531873 C1orf109Q9NX04 203 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 FBXL3Q9UKT7 428 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 C15orf41Q9Y2V0 281 aa1.67□□□□□ -2.14
CD44-234ENST00000531873 PUS1Q9Y606 427 aaKnown RBP eCLIP1.67□□□□□ -2.14
CD44-234ENST00000531873 CHD2O14647 1828 aaKnown RBP1.67□□□□□ -2.14
CD44-234ENST00000531873 BAZ1BQ9UIG0 1483 aaKnown RBP1.67□□□□□ -2.14
CD44-234ENST00000531873 TRAV8-3A0A0A6YYJ7 113 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 TRAV40A0A0B4J280 105 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 ISLRO14498 428 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 FGF16O43320 207 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 TCF21O43680 179 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 COX7A2P2O60397 106 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 SLC2A1P11166 492 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 MPV17P39210 176 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 IDH2P48735 452 aaKnown RBP1.66□□□□□ -2.14
CD44-234ENST00000531873 STC1P52823 247 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 BNIP2Q12982 314 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 ZNHIT3Q15649 155 aaPredicted RBP1.66□□□□□ -2.14
CD44-234ENST00000531873 UBE2NLQ5JXB2 153 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 DNLZQ5SXM8 178 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 FAM162BQ5T6X4 162 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 KHDRBS2Q5VWX1 349 aaKnown RBP1.66□□□□□ -2.14
CD44-234ENST00000531873 NIPAL1Q6NVV3 410 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 NEGR1Q7Z3B1 354 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 CRLF3Q8IUI8 442 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 H1FOOQ8IZA3 346 aaPredicted RBP1.66□□□□□ -2.14
CD44-234ENST00000531873 APCDD1LQ8NCL9 501 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 DDIT4LQ96D03 193 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 YPEL4Q96NS1 127 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 PEBP4Q96S96 227 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 PRSS27Q9BQR3 290 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 ZNF251Q9BRH9 671 aa1.66□□□□□ -2.14
CD44-234ENST00000531873 ZNF2Q9BSG1 426 aaPredicted RBP1.66□□□□□ -2.14
CD44-234ENST00000531873 FAAP24Q9BTP7 215 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms