RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 MRPS18AQ9NVS2 196 aaKnown RBP17.92■□□□□ 0.46
TRAPPC4-210ENST00000531290 MYRFQ9Y2G1 1151 aa17.92■□□□□ 0.46
TRAPPC4-210ENST00000531290 PRKDCP78527 4128 aaKnown RBP17.92■□□□□ 0.46
TRAPPC4-210ENST00000531290 CASQ2O14958 399 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 MMP23AO75900 390 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 CDK2P24941 298 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 LMO1P25800 156 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 GBX2P52951 348 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 BLCAPP62952 87 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 AESQ08117 197 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 OGFRL1Q5TC84 451 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 PRAMEF5Q5TYX0 476 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 RTN4RL2Q86UN3 420 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 SAXO1Q8IYX7 474 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 OR52I1Q8NGK6 324 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 OR5D14Q8NGL3 314 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 ZNF596Q8TC21 504 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 HAVCR2Q8TDQ0 301 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 CORO2AQ92828 525 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 ERVK13-1Q9NX77 482 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 TAS2R3Q9NYW6 316 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 DPM3Q9P2X0 92 aa17.91■□□□□ 0.46
TRAPPC4-210ENST00000531290 FAM90A22PA8MWA6 464 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 DEGS1O15121 323 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 CLIC3O95833 236 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 HCKP08631 526 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 TMEM225BP0DP42 221 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 BRS3P32247 399 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 VDAC2P45880 294 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 GLIPR1P48060 266 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 ARHGDIBP52566 201 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 MED21Q13503 144 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 HEPN1Q6WQI6 88 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 NDUFA11Q86Y39 141 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 SERPINA12Q8IW75 414 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 C8orf59Q8N0T1 100 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 OR4P4Q8NGL7 312 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 APH1BQ8WW43 257 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 CAPSLQ8WWF8 208 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 COMMD4Q9H0A8 199 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 CHCHD3Q9NX63 227 aaKnown RBP17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 HSPE1-MOB4S4R3N1 261 aa17.9■□□□□ 0.46
TRAPPC4-210ENST00000531290 WBP4O75554 376 aaKnown RBP17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 DCKP27707 260 aa17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 BDH1Q02338 343 aa17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 SMN1Q16637 294 aaKnown RBP17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 BEAN1Q3B7T3 259 aa17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 RNF144BQ7Z419 303 aa17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 CHST4Q8NCG5 386 aa17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 CNIH3Q8TBE1 160 aa17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 R3HDM4Q96D70 268 aa17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 AKR1E2Q96JD6 320 aa17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 CITED2Q99967 270 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 WNT10AQ9GZT5 417 aa17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 ISG20L2Q9H9L3 353 aaKnown RBP17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 ING3Q9NXR8 418 aa17.89■□□□□ 0.45
TRAPPC4-210ENST00000531290 ODAMA1E959 279 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 LEUTXA8MZ59 168 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 H0YHG0 523 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 TOR1AO14656 332 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 XPNPEP2O43895 674 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 ALX3O95076 343 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 MYL12AP19105 171 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 CAPGP40121 348 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 ADARB1P78563 741 aaKnown RBP17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 KISS1Q15726 138 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 KRBOX4Q5JUW0 171 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 SAMD5Q5TGI4 173 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 TMPRSS11AQ6ZMR5 421 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 Q6ZS46 218 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 OR4F17Q8NGA8 305 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 OR4D6Q8NGJ1 314 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 CREB3L1Q96BA8 519 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 OR4F4Q96R69 305 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 FGF20Q9NP95 211 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 DHDHQ9UQ10 334 aa17.88■□□□□ 0.45
TRAPPC4-210ENST00000531290 TMEM212A6NML5 194 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 SULT1B1O43704 296 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 ZFPL1O95159 310 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 CSN2P05814 226 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 CCDC159P0C7I6 412 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 CEACAM3P40198 252 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 PTGFRP43088 359 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 Q6P435 159 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 BAIAP2L2Q6UXY1 529 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 C16orf82Q7Z2V1 217 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 OR5AK2Q8NH90 309 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 MMP28Q9H239 520 aa17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 TET2Q6N021 2002 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC4-210ENST00000531290 FAM172BPA6NC97 362 aa17.86■□□□□ 0.45
TRAPPC4-210ENST00000531290 SLC33A1O00400 549 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC4-210ENST00000531290 CD24P25063 80 aa17.86■□□□□ 0.45
TRAPPC4-210ENST00000531290 PRRX1P54821 245 aa17.86■□□□□ 0.45
TRAPPC4-210ENST00000531290 KPRPQ5T749 579 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC4-210ENST00000531290 PARP16Q8N5Y8 322 aa17.86■□□□□ 0.45
TRAPPC4-210ENST00000531290 WIPF2Q8TF74 440 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC4-210ENST00000531290 TSEN15Q8WW01 171 aaKnown RBP17.86■□□□□ 0.45
TRAPPC4-210ENST00000531290 CPNE2Q96FN4 548 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC4-210ENST00000531290 JAM3Q9BX67 310 aa17.86■□□□□ 0.45
TRAPPC4-210ENST00000531290 LIN7BQ9HAP6 207 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms