RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 IKZF1Q13422 519 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 INSL4Q14641 139 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 LY6EQ16553 131 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 ACSM3Q53FZ2 586 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 SSX6Q7RTT6 188 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 KCTD20Q7Z5Y7 419 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 KLHDC1Q8N7A1 406 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 SAMD12Q8N8I0 201 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 BEND2Q8NDZ0 799 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 OR1M1Q8NGA1 313 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 TRMT10AQ8TBZ6 339 aaKnown RBP7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 PIFOQ8TCI5 191 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 WIPF2Q8TF74 440 aaPredicted RBP7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 NPRL2Q8WTW4 380 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 SPSB4Q96A44 273 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 PELI1Q96FA3 418 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 WWC2-AS2Q96NR7 200 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 TLNRD1Q9H1K6 362 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 MMP28Q9H239 520 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 COPZ2Q9P299 210 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 ZNF319Q9P2F9 582 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 RYR2Q92736 4967 aa7.48□□□□□ -1.21
CHMP4A-205ENST00000531158 CENPXA8MT69 81 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 CDIPTO14735 213 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 GSTZ1O43708 216 aaPredicted RBP7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 TPPPO94811 219 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 HLA-DQA2P01906 255 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 GYPBP06028 91 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 GSTT2P0CG29 244 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 GSTT2BP0CG30 244 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 MUC1P15941 1255 aaPredicted RBP7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 MAPK3P27361 379 aaPredicted RBP7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 SLC6A1P30531 599 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 KIR2DS4P43632 304 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 PRKXP51817 358 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 SCAND1P57086 179 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 MRPS15P82914 257 aaKnown RBP7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 FAM3AP98173 230 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 HABP2Q14520 560 aaPredicted RBP7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 TATDN3Q17R31 274 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 TP53I3Q53FA7 332 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 YIF1BQ5BJH7 314 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 UBE2NLQ5JXB2 153 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 ZNF684Q5T5D7 378 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 ATPAF1Q5TC12 328 aaPredicted RBP7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 LINC01590Q5TEZ4 76 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 DRAM2Q6UX65 266 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 UNQ9370/PRO34162Q6UXP9 181 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 Q6ZTK2 550 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 SLC16A9Q7RTY1 509 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 PRSS45Q7RTY3 260 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 FAM220AQ7Z4H9 259 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 DCXRQ7Z4W1 244 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 OR4M1Q8NGD0 313 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 OR51L1Q8NGJ5 315 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 OR2AJ1Q8NGZ0 328 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 OR5R1Q8NH85 324 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 GHSRQ92847 366 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 RNF170Q96K19 258 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 GAFA1Q96PS6 74 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 SLA2Q9H6Q3 261 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 NIPAL2Q9H841 368 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 ELL3Q9HB65 397 aaPredicted RBP7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 SERTAD4Q9NUC0 356 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 SPATA2Q9UM82 520 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 MAB21L2Q9Y586 359 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 N6AMT1Q9Y5N5 214 aa7.47□□□□□ -1.21
CHMP4A-205ENST00000531158 hCG_38984A0A1B0GV85 526 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 LINC00854A0A1B0GVQ3 168 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 C7orf66A4D0T2 115 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 BTBD17A6NE02 478 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 RENP00797 406 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 CD28P10747 220 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 S100A1P23297 94 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 ERP29P30040 261 aaKnown RBP7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 NAA10P41227 235 aaPredicted RBP7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 UBE2E1P51965 193 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 OR10A3P58181 314 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 GMFBP60983 142 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 RPS11P62280 158 aaKnown RBP eCLIP7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 MRPS10P82664 201 aaKnown RBP7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 IFITM2Q01629 132 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 GUCA2AQ02747 115 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 CDK10Q15131 360 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 MICBQ29980 383 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 PLA1AQ53H76 456 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 ZNF57Q68EA5 555 aaPredicted RBP7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 ZNF788Q6ZQV5 615 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 NOXA1Q86UR1 476 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 SPERTQ8NA61 448 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 OR2T4Q8NH00 348 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 ANGPTL6Q8NI99 470 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 CAPSLQ8WWF8 208 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 SPTSSAQ969W0 71 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 PHF21AQ96BD5 680 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 SGK3Q96BR1 496 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 SLAMF6Q96DU3 332 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 DMRTB1Q96MA1 342 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 SSX3Q99909 188 aa7.46□□□□□ -1.22
CHMP4A-205ENST00000531158 PPIL3Q9H2H8 161 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 333.1 ms