RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 UTS2BQ765I0 119 aa12.61□□□□□ -0.39
CHMP4A-204ENST00000530996 AMIGO2Q86SJ2 522 aa12.61□□□□□ -0.39
CHMP4A-204ENST00000530996 RPEQ96AT9 228 aa12.61□□□□□ -0.39
CHMP4A-204ENST00000530996 GPR61Q9BZJ8 451 aa12.61□□□□□ -0.39
CHMP4A-204ENST00000530996 SEBOXQ9HB31 216 aaPredicted RBP12.61□□□□□ -0.39
CHMP4A-204ENST00000530996 IMPAD1Q9NX62 359 aa12.61□□□□□ -0.39
CHMP4A-204ENST00000530996 TAS2R3Q9NYW6 316 aa12.61□□□□□ -0.39
CHMP4A-204ENST00000530996 WI2-2373I1.2A0A1W2PRP0 233 aa12.6□□□□□ -0.39
CHMP4A-204ENST00000530996 PSMB11A5LHX3 300 aa12.6□□□□□ -0.39
CHMP4A-204ENST00000530996 HTR1AP08908 422 aa12.6□□□□□ -0.39
CHMP4A-204ENST00000530996 PRRX1P54821 245 aa12.6□□□□□ -0.39
CHMP4A-204ENST00000530996 ZNF85Q03923 595 aa12.6□□□□□ -0.39
CHMP4A-204ENST00000530996 HES1Q14469 280 aa12.6□□□□□ -0.39
CHMP4A-204ENST00000530996 OSR2Q8N2R0 312 aa12.6□□□□□ -0.39
CHMP4A-204ENST00000530996 OR8J1Q8NGP2 316 aa12.6□□□□□ -0.39
CHMP4A-204ENST00000530996 OR2G2Q8NGZ5 317 aa12.6□□□□□ -0.39
CHMP4A-204ENST00000530996 INPP5EQ9NRR6 644 aa12.6□□□□□ -0.39
CHMP4A-204ENST00000530996 AMMECR1Q9Y4X0 333 aaPredicted RBP12.6□□□□□ -0.39
CHMP4A-204ENST00000530996 IGKV1-12A0A0C4DH73 117 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 DAPL1A0PJW8 107 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 BUB1B-PAK6H3BSN5 160 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 IGKV1D-12P01611 117 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 IGLV1-47P01700 117 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 HCKP08631 526 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 FAM106CPP0CH98 169 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 FCGR1AP12314 374 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 KRTAP10-11P60412 298 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 LPCAT4Q643R3 524 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 CHST4Q8NCG5 386 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 OR56B4Q8NH76 319 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 SLC7A6OSQ96CW6 309 aaPredicted RBP12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 COMMD4Q9H0A8 199 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 PPIL3Q9H2H8 161 aaKnown RBP12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 PCDHB16Q9NRJ7 776 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 HHLA2Q9UM44 414 aa12.59□□□□□ -0.39
CHMP4A-204ENST00000530996 ZNF729A6NN14 1252 aaPredicted RBP12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 KDM4BO94953 1096 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 IGHV3-7P01780 117 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 SNRNP70P08621 437 aaKnown RBP12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 CCDC159P0C7I6 412 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 TMEM225BP0DP42 221 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 CD34P28906 385 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 POLR2IP36954 125 aaKnown RBP12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 ISL1P61371 349 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 TMED1Q13445 227 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 LTC4SQ16873 150 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 C1orf146Q5VVC0 180 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 ZNF329Q86UD4 541 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 LINC00482Q8N8I6 264 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 OR51A4Q8NGJ6 313 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 OR10AC1Q8NH08 325 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 EME1Q96AY2 570 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 COQ2Q96H96 371 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 GABARAPL3Q9BY60 117 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 OR6C3Q9NZP0 311 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 AP4S1Q9Y587 144 aa12.58□□□□□ -0.4
CHMP4A-204ENST00000530996 SAC3D1A6NKF1 404 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 OOSP1A8MZH6 123 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 SLC33A1O00400 549 aaPredicted RBP12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 DEGS1O15121 323 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 SLC16A6O15403 523 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 AMY1AP04745 511 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 AMY2AP04746 511 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 CSN2P05814 226 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 TMEM11P17152 192 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 GNG10P50151 68 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 PAN3Q58A45 887 aaKnown RBP12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 OR9G1Q8NH87 305 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 CORO2AQ92828 525 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 LEAP2Q969E1 77 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 RNFT2Q96EX2 444 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 HRASLS5Q96KN8 279 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 NR1H4Q96RI1 486 aaPredicted RBP12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 MBOAT4Q96T53 435 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 CALYQ9NYX4 217 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 FRRS1LQ9P0K9 344 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 OAZ3Q9UMX2 235 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 DNAH3Q8TD57 4116 aa12.57□□□□□ -0.4
CHMP4A-204ENST00000530996 MEIKINA0A087WXM9 373 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 SERPINE3A8MV23 424 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 H0YJX3 145 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 J3QLW9 94 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 ZNF19P17023 458 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 RAB25P57735 213 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 NANOS3P60323 173 aaKnown RBP12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 RPL23AP62750 156 aaKnown RBP12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 C8orf86Q6ZUL3 223 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 MRPL41Q8IXM3 137 aaKnown RBP12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 KLHL30-AS1Q8NEE0 82 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 CHPT1Q8WUD6 406 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 TSEN15Q8WW01 171 aaKnown RBP12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 MRPL48Q96GC5 212 aaKnown RBP12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 KIRREL1Q96J84 757 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 C4orf36Q96KX1 117 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 NOL4LQ96MY1 436 aaPredicted RBP12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 RHOFQ9HBH0 211 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 KIF25Q9UIL4 384 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 ORC6Q9Y5N6 252 aa12.56□□□□□ -0.4
CHMP4A-204ENST00000530996 KBTBD11-OT1A0A1B0GTJ5 212 aa12.55□□□□□ -0.4
CHMP4A-204ENST00000530996 ISG15P05161 165 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms