RNA–Protein interactions for RNA: ENST00000530405.5

PACSIN3-206, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-206ENST00000530405 IGKV1D-33P01593 117 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 IGKV1-33P01594 117 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 CSN2P05814 226 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 PRKACAP17612 351 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 BCL3P20749 454 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 NFYBP25208 207 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 GPR12P47775 334 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 RAB7AP51149 207 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 MADCAM1Q13477 382 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 C17orf58Q2M2W7 97 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 ZNF322Q6U7Q0 402 aaPredicted RBP12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 ZNF429Q86V71 674 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 KIRREL1Q96J84 757 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 APOL4Q9BPW4 351 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 CHST5Q9GZS9 411 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 ABCG5Q9H222 651 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 EDA2RQ9HAV5 297 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 HMG20AQ9NP66 347 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 EXOSC4Q9NPD3 245 aaKnown RBP12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 LIN7CQ9NUP9 197 aaKnown RBP12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 ACTR3BQ9P1U1 418 aa12.75□□□□□ -0.37
PACSIN3-206ENST00000530405 TCRBV5S2A0A599 114 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 CCDC182A6NF36 153 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 J3QR06 171 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 SERPINA3P01011 423 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 HCKP08631 526 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 ATP6V1B2P21281 511 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 SNU13P55769 128 aaKnown RBP12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 CXCR4P61073 352 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 EBI3Q14213 229 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 PLEKHG7Q6ZR37 379 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 TGIF2LXQ8IUE1 241 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 DNAAF1Q8NEP3 725 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 OR11H1Q8NG94 326 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 RNFT2Q96EX2 444 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 TM2D3Q9BRN9 247 aa12.74□□□□□ -0.37
PACSIN3-206ENST00000530405 KBTBD11-OT1A0A1B0GTJ5 212 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 MAGEB4O15481 346 aaPredicted RBP12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 IGHG4P01861 327 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 OR8U8P0C7N1 319 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 CGB3P0DN86 165 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 CGB7P0DN87 165 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 CALCBP10092 127 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 OSMP13725 252 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 VEGFCP49767 419 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 RBP2P50120 134 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 ATP1B3P54709 279 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 CFHR3Q02985 330 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 DIAPH2-AS1Q14236 149 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 KRBOX4Q5JUW0 171 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 CCDC54Q8NEL0 328 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 HAVCR2Q8TDQ0 301 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 COQ2Q96H96 371 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 CNN2Q99439 309 aaKnown RBP12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 MNTQ99583 582 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 TEX12Q9BXU0 123 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 OR6C3Q9NZP0 311 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 GSTK1Q9Y2Q3 226 aa12.73□□□□□ -0.37
PACSIN3-206ENST00000530405 SYT7O43581 403 aa12.72□□□□□ -0.37
PACSIN3-206ENST00000530405 RRP9O43818 475 aaKnown RBP12.72□□□□□ -0.37
PACSIN3-206ENST00000530405 CHST4Q8NCG5 386 aa12.72□□□□□ -0.37
PACSIN3-206ENST00000530405 C10orf35Q96D05 121 aa12.72□□□□□ -0.37
PACSIN3-206ENST00000530405 COMMD4Q9H0A8 199 aa12.72□□□□□ -0.37
PACSIN3-206ENST00000530405 KRT84Q9NSB2 600 aa12.72□□□□□ -0.37
PACSIN3-206ENST00000530405 ARGLU1Q9NWB6 273 aaPredicted RBP12.72□□□□□ -0.37
PACSIN3-206ENST00000530405 MRM2Q9UI43 246 aaKnown RBP12.72□□□□□ -0.37
PACSIN3-206ENST00000530405 NCBP2LA6PVI3 153 aaKnown RBP12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 MPZL2O60487 215 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 PSMB8P28062 276 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 POU3F4P49335 361 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 ODF4Q2M2E3 257 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 FAM98BQ52LJ0 330 aaKnown RBP12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 C16orf89Q6UX73 402 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 Q8N6K4 173 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 Q8N9W7 124 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 MYOZ3Q8TDC0 251 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 PP6455Q8WZ26 134 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 EAF1Q96JC9 268 aaPredicted RBP12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 SLC25A19Q9HC21 320 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 ISYNA1Q9NPH2 558 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 PSG11Q9UQ72 335 aa12.71□□□□□ -0.37
PACSIN3-206ENST00000530405 H3BSH0 61 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 LDLRAD4O15165 306 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 SASH3O75995 380 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 JTBO76095 146 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 IGHV3-7P01780 117 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 GP9P14770 177 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 ZNF44P15621 663 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 SPNP16150 400 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 MTCP1P56278 107 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 RUNX1Q01196 453 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 ZNF816Q0VGE8 651 aaPredicted RBP12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 BNIP1Q12981 228 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 PDZK1IP1Q13113 114 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 ASPHD1Q5U4P2 390 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 TMEM236Q5W0B7 351 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 CATSPERDQ86XM0 798 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 SLC35F2Q8IXU6 374 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 IZUMO1Q8IYV9 350 aa12.7□□□□□ -0.38
PACSIN3-206ENST00000530405 DEFB107AQ8IZN7 70 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms