RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 RGPD3A6NKT7 1758 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-221ENST00000529873 IGHV3-43A0A0B4J1X8 118 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 MPZL1O95297 269 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 KRASP01116 189 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 GCGP01275 180 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 IGHV3-43DP0DP04 118 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 PMS2P11Q13670 270 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 LINC00596Q86U02 117 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 CCL17Q92583 94 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 GPR137Q96N19 417 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 CITO14578 2027 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 UBR3Q6ZT12 1888 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 IGHV5-10-1A0A0J9YXX1 117 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 A0A1W2PNV4 684 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 DNPH1O43598 174 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 SMPD2O60906 423 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 CST7O76096 145 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 ZFPL1O95159 310 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 CD3EP07766 207 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 HTR1DP28221 377 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 FAM3AP98173 230 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 SP6Q3SY56 376 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 TTC32Q5I0X7 151 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 ZNF343Q6P1L6 599 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 TMEM65Q6PI78 240 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 SLC16A12Q6ZSM3 486 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 TMEM116Q8NCL8 245 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 PTP4A1Q93096 173 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 RNF2Q99496 336 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 LOC390937A0A1W2PQ73 354 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 ZNF716A6NP11 495 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 H3BP45 60 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 RAC3P60763 192 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 TMEM251Q8N6I4 163 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 RAB24Q969Q5 203 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 TRAV38-1A0A0B4J264 116 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 LEUTXA8MZ59 168 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 NEURL1O76050 574 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 MAGEA5P43359 124 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 GZMKP49863 264 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 DLX1P56177 255 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 LSM6P62312 80 aaKnown RBP7.51□□□□□ -1.21
CTNND1-221ENST00000529873 LRP11Q86VZ4 500 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 OR2Y1Q8NGV0 311 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 MRGPRDQ8TDS7 321 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 NXF2Q9GZY0 626 aaKnown RBP7.51□□□□□ -1.21
CTNND1-221ENST00000529873 SEBOXQ9HB31 216 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-221ENST00000529873 MRM2Q9UI43 246 aaKnown RBP7.51□□□□□ -1.21
CTNND1-221ENST00000529873 GOLGA4Q13439 2230 aaKnown RBP7.51□□□□□ -1.21
CTNND1-221ENST00000529873 RBBP6Q7Z6E9 1792 aaKnown RBP7.51□□□□□ -1.21
CTNND1-221ENST00000529873 MS4A18H0YCH9 400 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 IGHA1P01876 353 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 PNLIPP16233 465 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 CSF2RBP32927 897 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 ERVFRD-1P60508 538 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 TIAL1Q01085 375 aaKnown RBP eCLIP7.51□□□□□ -1.215e-7■■■■■ 26.8
CTNND1-221ENST00000529873 CLEC12BQ2HXU8 276 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 MS4A18Q3C1V0 323 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 DGAT2L7PQ6IED9 249 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 MUC20Q8N307 709 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-221ENST00000529873 ADTRPQ96IZ2 230 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 DUSP15Q9H1R2 295 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-221ENST00000529873 ZNF552Q9H707 407 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-221ENST00000529873 RASL12Q9NYN1 266 aa7.51□□□□□ -1.21
CTNND1-221ENST00000529873 ZNF737O75373 536 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 HAND1O96004 215 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 MBPP02686 304 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-221ENST00000529873 INHBBP09529 407 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 OR5AC1P0C628 307 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 CD200P41217 278 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 GNG4P50150 75 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 RAG2P55895 527 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 SRSF9Q13242 221 aaKnown RBP eCLIP7.5□□□□□ -1.21
CTNND1-221ENST00000529873 SAMD13Q5VXD3 122 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 MRM1Q6IN84 353 aaKnown RBP7.5□□□□□ -1.21
CTNND1-221ENST00000529873 FDX2Q6P4F2 183 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 TUSC5Q8IXB3 177 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 NUDT10Q8NFP7 164 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 RPS4Y2Q8TD47 263 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 SCMH1Q96GD3 660 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 FAM60AQ9NP50 221 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 ATAD5Q96QE3 1844 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 OGG1O15527 345 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 NUDT3O95989 172 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 BGLAPP02818 100 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 CTLA4P16410 223 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 SRP14P37108 136 aaKnown RBP7.5□□□□□ -1.21
CTNND1-221ENST00000529873 SULT1A1P50225 295 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 ATP5IP56385 69 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-221ENST00000529873 SRSF5Q13243 272 aaKnown RBP7.5□□□□□ -1.21
CTNND1-221ENST00000529873 FAHD2BQ6P2I3 314 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-221ENST00000529873 FAHD2AQ96GK7 314 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 VSTM2LQ96N03 204 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 RASL10BQ96S79 203 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 KCNK15Q9H427 330 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 SMOC1Q9H4F8 434 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 PLAC1Q9HBJ0 212 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 A0A1B0GTH9 108 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 FCN1O00602 326 aa7.5□□□□□ -1.21
CTNND1-221ENST00000529873 GYPAP02724 150 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms