RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 OR10R2Q8NGX6 335 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 CLDND2Q8NHS1 167 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 NDNFQ8TB73 568 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 LGALS14Q8TCE9 139 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 DYNC2LI1Q8TCX1 351 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 DPCDQ9BVM2 203 aaPredicted RBP6.62□□□□□ -1.35
SSBP3-211ENST00000528787 C6orf62Q9GZU0 229 aaPredicted RBP6.62□□□□□ -1.35
SSBP3-211ENST00000528787 RBM38Q9H0Z9 239 aaKnown RBP6.62□□□□□ -1.35
SSBP3-211ENST00000528787 WDR13Q9H1Z4 485 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.62□□□□□ -1.35
SSBP3-211ENST00000528787 RCC2Q9P258 522 aaKnown RBP6.62□□□□□ -1.35
SSBP3-211ENST00000528787 ZNF222Q9UK12 451 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 ITGB1BP2Q9UKP3 347 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 CACNG2Q9Y698 323 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 PRRC2AP48634 2157 aaKnown RBP6.62□□□□□ -1.35
SSBP3-211ENST00000528787 KIR2DS1A0A191URI9 304 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 A0A1W2PQ09 198 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 A6NHS1 94 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.61□□□□□ -1.35
SSBP3-211ENST00000528787 SIRPB1O00241 398 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 SLC33A1O00400 549 aaPredicted RBP6.61□□□□□ -1.35
SSBP3-211ENST00000528787 DVL1O14640 695 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 WNT9BO14905 357 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 XRCC3O43542 346 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 DIRAS3O95661 229 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 MSMBP08118 114 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 EGR1P18146 543 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 KIR2DS4P43632 304 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 VEGFCP49767 419 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 DVL1P1P54792 670 aaPredicted RBP6.61□□□□□ -1.35
SSBP3-211ENST00000528787 EDDM3BP56851 147 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 GNG2P59768 71 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 BPIFB3P59826 476 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 RPL31P62899 125 aaKnown RBP6.61□□□□□ -1.35
SSBP3-211ENST00000528787 QRFPP83859 136 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 ARFRP1Q13795 201 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 KIR2DS1Q14954 304 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 SRSF7Q16629 238 aaKnown RBP eCLIP6.61□□□□□ -1.35
SSBP3-211ENST00000528787 PIGYQ3MUY2 71 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 KRBOX4Q5JUW0 171 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 WDR25Q64LD2 544 aaPredicted RBP6.61□□□□□ -1.35
SSBP3-211ENST00000528787 C1QL2Q7Z5L3 287 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 TRAPPC6BQ86SZ2 158 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 OR10K1Q8NGX5 313 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 C8orf46Q8TAG6 207 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 FAM216AQ8WUB2 273 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 ST8SIA4Q92187 359 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 H1FXQ92522 213 aaKnown RBP6.61□□□□□ -1.35
SSBP3-211ENST00000528787 CREB3L1Q96BA8 519 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 C1orf159Q96HA4 380 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 C18orf12Q96KH6 178 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 C1orf147Q96MC9 270 aaPredicted RBP6.61□□□□□ -1.35
SSBP3-211ENST00000528787 ZNF488Q96MN9 340 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 GAFA1Q96PS6 74 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 CCL13Q99616 98 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 GFI1Q99684 422 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 CHST6Q9GZX3 395 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 NAA50Q9GZZ1 169 aaKnown RBP6.61□□□□□ -1.35
SSBP3-211ENST00000528787 LPAR5Q9H1C0 372 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 BANF2Q9H503 90 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 SCPEP1Q9HB40 452 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 CHMP1AQ9HD42 196 aaPredicted RBP6.61□□□□□ -1.35
SSBP3-211ENST00000528787 C12orf4Q9NQ89 552 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 ETAA1Q9NY74 926 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 TAS2R3Q9NYW6 316 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 COMMD3Q9UBI1 195 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 LINC00312Q9Y6C7 94 aa6.61□□□□□ -1.35
SSBP3-211ENST00000528787 IGHV3OR15-7A0A075B7D8 119 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 SHISA3A0PJX4 238 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 ZNF729A6NN14 1252 aaPredicted RBP6.6□□□□□ -1.35
SSBP3-211ENST00000528787 RNF223E7ERA6 249 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 M0R1W7 72 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 SULT1C2O00338 296 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 TNFRSF13BO14836 293 aaPredicted RBP6.6□□□□□ -1.35
SSBP3-211ENST00000528787 SPINT2O43291 252 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 ORC5O43913 435 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 ZNF737O75373 536 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 RGS11O94810 467 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 CTXN2P0C2S0 81 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 SLC2A2P11168 524 aaPredicted RBP6.6□□□□□ -1.35
SSBP3-211ENST00000528787 SNRPBP14678 240 aaKnown RBP6.6□□□□□ -1.35
SSBP3-211ENST00000528787 HIST1H1DP16402 221 aaKnown RBP6.6□□□□□ -1.35
SSBP3-211ENST00000528787 GLP1RP43220 463 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 SNU13P55769 128 aaKnown RBP6.6□□□□□ -1.35
SSBP3-211ENST00000528787 P2RX3P56373 397 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 CLDN12P56749 244 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 ACTBP60709 375 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 LMO4P61968 165 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 ACTG1P63261 375 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 GUCA2AQ02747 115 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 SSBP1Q04837 148 aaKnown RBP6.6□□□□□ -1.35
SSBP3-211ENST00000528787 UNC119Q13432 240 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 SPCS2Q15005 226 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 TMEM249Q2WGJ8 235 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 SPRNQ5BIV9 151 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 NKAPLQ5M9Q1 402 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 METTL11BQ5VVY1 283 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 DCAF12L2Q5VW00 463 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 NCR3LG1Q68D85 454 aa6.6□□□□□ -1.35
SSBP3-211ENST00000528787 Q6P435 159 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms