RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 RDH5Q92781 318 aa6.42□□□□□ -1.38
C11orf54-207ENST00000528288 LRFN1Q9P244 771 aa6.42□□□□□ -1.38
C11orf54-207ENST00000528288 LAMA5O15230 3695 aa6.42□□□□□ -1.38
C11orf54-207ENST00000528288 hCG_1809904A0A1W2PP81 198 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 A0A1W2PR64 198 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 A0A1W2PRV1 198 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 ARGFXA6NJG6 315 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 A6NLC8 198 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 RRP8O43159 456 aaKnown RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 SYNGR1O43759 233 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 PDCD6O75340 191 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 MRPL33O75394 65 aaKnown RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 FKBP2P26885 142 aaKnown RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 GLP1RP43220 463 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 CYB561P49447 251 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 RUNX1Q01196 453 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 ZFP36L1Q07352 338 aaKnown RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 C10orf91Q5T1B1 145 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 CPT1CQ8TCG5 803 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 C12orf57Q99622 126 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 C12orf49Q9H741 205 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 SPENQ96T58 3664 aaKnown RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 A0A1W2PPE3 182 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 A0A1W2PPH5 198 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 GJE1A6NN92 205 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 E5RGE8 158 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 ADAM20O43506 726 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 NDUFA2O43678 99 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 CD5P06127 495 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 ZNF44P15621 663 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 FUT6P51993 359 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 PRDX4Q13162 271 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 GUK1Q16774 197 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 AWAT1Q58HT5 328 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 AVPI1Q5T686 147 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 EIF5AL1Q6IS14 154 aaKnown RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 ZNF818PQ6ZRF7 136 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 TBC1D26Q86UD7 250 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 GAPTQ8N292 157 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 DMBX1Q8NFW5 382 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 SAT2Q96F10 170 aaPredicted RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 CDX2Q99626 313 aaPredicted RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 USB1Q9BQ65 265 aaKnown RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 ZNF552Q9H707 407 aaPredicted RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 CCL28Q9NRJ3 127 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 NSG2Q9Y328 171 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 STARD10Q9Y365 291 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 C3orf85A0A1B0GTC6 90 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 COLCA2A8K830 154 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 ZNF732B4DXR9 585 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 NTN3O00634 580 aaPredicted RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 TAAR5O14804 337 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 GLAP06280 429 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 SELEP16581 610 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 FUT3P21217 361 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 GNRHRP30968 328 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 MAGEA5P43359 124 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 TLE1Q04724 770 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 RBMS3Q6XE24 437 aaKnown RBP6.41□□□□□ -1.38
C11orf54-207ENST00000528288 IL1F10Q8WWZ1 152 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 C18orf12Q96KH6 178 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 CACFD1Q9UGQ2 172 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 LOXL2Q9Y4K0 774 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 GTF3C1Q12789 2109 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 KIAA1549Q9HCM3 1950 aa6.41□□□□□ -1.38
C11orf54-207ENST00000528288 ZNF816-ZNF321PA0A0X1KG74 233 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 A0A1W2PPE2 198 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 ZNF98A6NK75 572 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 MPPED1O15442 326 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 ST8SIA3O43173 380 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 DVL1P1P54792 670 aaPredicted RBP6.4□□□□□ -1.38
C11orf54-207ENST00000528288 EIF5AP63241 154 aaKnown RBP6.4□□□□□ -1.38
C11orf54-207ENST00000528288 C20orf204Q6ZNR8 217 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 P4HA3Q7Z4N8 544 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 LGI3Q8N145 548 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 OR51H1Q8NH63 302 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 INTS12Q96CB8 462 aaKnown RBP6.4□□□□□ -1.38
C11orf54-207ENST00000528288 ADGRG7Q96K78 797 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 RGCCQ9H4X1 137 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 C19orf12Q9NSK7 152 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 FAM212BQ9NTI7 297 aaPredicted RBP6.4□□□□□ -1.38
C11orf54-207ENST00000528288 EDARQ9UNE0 448 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 ZNF175Q9Y473 711 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 PUS1Q9Y606 427 aaKnown RBP eCLIP6.4□□□□□ -1.38
C11orf54-207ENST00000528288 PCSK5Q92824 1860 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 IGSF23A1L1A6 192 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 FAM157AC9JC47 383 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 TERTO14746 1132 aaKnown RBP6.4□□□□□ -1.38
C11orf54-207ENST00000528288 MMP7P09237 267 aaPredicted RBP6.4□□□□□ -1.38
C11orf54-207ENST00000528288 OR2B8PP59922 312 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 EWSR1Q01844 656 aaKnown RBP eCLIP6.4□□□□□ -1.38
C11orf54-207ENST00000528288 HERPUD1Q15011 391 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 ARL6IP1Q15041 203 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 ZNF695Q8IW36 515 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 MOB3AQ96BX8 217 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 SGCZQ96LD1 299 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 SF3B5Q9BWJ5 86 aaKnown RBP6.4□□□□□ -1.38
C11orf54-207ENST00000528288 PARP11Q9NR21 331 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 MTCH1Q9NZJ7 389 aa6.4□□□□□ -1.38
C11orf54-207ENST00000528288 HSF4Q9ULV5 492 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms