RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 BATF2Q8N1L9 274 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 CPEB3Q8NE35 698 aaKnown RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 OR6X1Q8NH79 312 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 PTPMT1Q8WUK0 201 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 FBLIM1Q8WUP2 373 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 NDUFAF3Q9BU61 184 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 SPRY1O43609 319 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 MPC2O95563 127 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 IL2RAP01589 272 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 HIST1H1DP16402 221 aaKnown RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 GLRA1P23415 457 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 SRD5A2P31213 254 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 OPRM1P35372 400 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 SUCLG1P53597 346 aaKnown RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 MLF1P58340 268 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 FAM3AP98173 230 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 INSM1Q01101 510 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 CD300CQ08708 224 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 TMEM268Q5VZI3 342 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 PWWP2BQ6NUJ5 590 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 ALKBH3Q96Q83 286 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 NRIP2Q9BQI9 281 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 NAT8BQ9UHF3 227 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 BGLAPP02818 100 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 HEXAP06865 529 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 CYC1P08574 325 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 SEC11BP0C7V7 166 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 GPR12P47775 334 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 ERVFC1-1P60608 527 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 RPL11P62913 178 aaKnown RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 HES1Q14469 280 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 WIPI1Q5MNZ9 446 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 ZNF362Q5T0B9 420 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 OR2M7Q8NG81 312 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 OR1P1Q8NH06 330 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 P4HTMQ9NXG6 502 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 RNF24Q9Y225 148 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 A0A0B4J293 547 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 TMEM238LA0A1B0GVL6 79 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 A6NJY4 79 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 SSSCA1O60232 199 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 CNIH1O95406 144 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 HAND1O96004 215 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 CTLA4P16410 223 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 RPL7P18124 248 aaKnown RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 GCSHP23434 173 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 MVDP53602 400 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 GGTLC2Q14390 218 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 OR52L2PQ8NGH6 319 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 OR5A2Q8NGI9 324 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 SNX22Q96L94 193 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 OR1A1Q9P1Q5 309 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 WASHC3Q9Y3C0 194 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 IGKV1-8A0A0C4DH67 115 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 TCRBV16S1A1N1A0A5B0 115 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 FCN1O00602 326 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 DUS4LO95620 317 aaKnown RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 IGHV4-34P06331 123 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 AKR1C3P42330 323 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 ASCL1P50553 236 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 NHLH1Q02575 133 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 Q8IYB0 196 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 ZNF687Q8N1G0 1237 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 RDH5Q92781 318 aa6.39□□□□□ -1.39
CTNND1-218ENST00000528232 DUSP15Q9H1R2 295 aaPredicted RBP6.39□□□□□ -1.39
CTNND1-218ENST00000528232 TRPM6Q9BX84 2022 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 LOC102724200A0A096LPH7 203 aaPredicted RBP6.38□□□□□ -1.39
CTNND1-218ENST00000528232 LIPT2A6NK58 231 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 DIRC3C9JPN6 131 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 CDC14BO60729 498 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 HPP00738 406 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 FUT3P21217 361 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 CNN1P51911 297 aaKnown RBP6.38□□□□□ -1.39
CTNND1-218ENST00000528232 ATP5IP56385 69 aaPredicted RBP6.38□□□□□ -1.39
CTNND1-218ENST00000528232 KISS1Q15726 138 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 SLC35E3Q7Z769 313 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 H1FXQ92522 213 aaKnown RBP6.38□□□□□ -1.39
CTNND1-218ENST00000528232 TAAR6Q96RI8 345 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 BARX1Q9HBU1 254 aaPredicted RBP6.38□□□□□ -1.39
CTNND1-218ENST00000528232 TRAV34A0A0B4J273 112 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 LINC00587B1AMM8 73 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 PRRG2O14669 202 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 RER1O15258 196 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 CD1AP06126 327 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 MPLP40238 635 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 LGALS4P56470 323 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 NIT1Q86X76 327 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 C1orf210Q8IVY1 113 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 RTN4IP1Q8WWV3 396 aaPredicted RBP6.38□□□□□ -1.39
CTNND1-218ENST00000528232 OPN4Q9UHM6 478 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 VAX2Q9UIW0 290 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 FAM221AA4D161 298 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 NTN1O95631 604 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 MT-CO3P00414 261 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 PNLIPP16233 465 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 PI3P19957 117 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 CDC34P49427 236 aaPredicted RBP6.38□□□□□ -1.39
CTNND1-218ENST00000528232 SURF2Q15527 256 aaPredicted RBP6.38□□□□□ -1.39
CTNND1-218ENST00000528232 DEFB109BQ30KR1 87 aa6.38□□□□□ -1.39
CTNND1-218ENST00000528232 SPANXN5Q5MJ07 72 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms