RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 GNG10P50151 68 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 C9orf152Q5JTZ5 239 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 VWA1Q6PCB0 445 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 GPR137Q96N19 417 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 IGHV3-43A0A0B4J1X8 118 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 JTBO76095 146 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 IGHV3-43DP0DP04 118 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 S100PP25815 95 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 RBMXL3Q8N7X1 1067 aaKnown RBP13.06□□□□□ -0.32
USP47-207ENST00000527733 WDR89Q96FK6 387 aaPredicted RBP13.06□□□□□ -0.32
USP47-207ENST00000527733 MAGT1Q9H0U3 335 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 SLC39A9Q9NUM3 307 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 PINLYPA6NC86 204 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 OOEPA6NGQ2 149 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 RFPL4AA6NLU0 287 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 ATP6V1G2-DDX39BF2Z307 99 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 RFPL4AL1F8VTS6 287 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 ACSF3Q4G176 576 aaPredicted RBP13.05□□□□□ -0.32
USP47-207ENST00000527733 MUC20Q8N307 709 aaPredicted RBP13.05□□□□□ -0.32
USP47-207ENST00000527733 ZNF488Q96MN9 340 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 TAF9BQ9HBM6 251 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 FAM3AP98173 230 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 Q0VFX4 171 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 IL13RA2Q14627 380 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 ST3GAL2Q16842 350 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 TMEM104Q8NE00 496 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 OR8G5Q8NG78 346 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 NAA60Q9H7X0 242 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 ROS1P08922 2347 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 TECTAO75443 2155 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 ERHP84090 104 aaKnown RBP13.05□□□□□ -0.32
USP47-207ENST00000527733 TIMM23BQ5SRD1 257 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 MOB3BQ86TA1 216 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 SUMF2Q8NBJ7 301 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 NPAS1Q99742 590 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 CNTNAP3Q9BZ76 1288 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 NPTNQ9Y639 398 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 PLXNA2O75051 1894 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 LOC390937A0A1W2PQ73 354 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 RPL36A-HNRNPH2H7BZ11 118 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 ATF4P18848 351 aaPredicted RBP13.05□□□□□ -0.32
USP47-207ENST00000527733 FGF12P61328 243 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 Q3ZCU0 254 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 OR10P1Q8NGE3 313 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 KLF14Q8TD94 323 aaPredicted RBP13.05□□□□□ -0.32
USP47-207ENST00000527733 ADAMTS17Q8TE56 1095 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 ELOVL5Q9NYP7 299 aa13.05□□□□□ -0.32
USP47-207ENST00000527733 STRAPQ9Y3F4 350 aaKnown RBP13.05□□□□□ -0.32
USP47-207ENST00000527733 C9orf170A2RU37 121 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 ICMTO60725 284 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 DUS4LO95620 317 aaKnown RBP13.04□□□□□ -0.32
USP47-207ENST00000527733 CTSDP07339 412 aaPredicted RBP13.04□□□□□ -0.32
USP47-207ENST00000527733 SULT1A3P0DMM9 295 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 SULT1A4P0DMN0 295 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 OR5T1Q8NG75 326 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 HPSE2Q8WWQ2 592 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 OR5B12Q96R08 314 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 LPAR5Q9H1C0 372 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 OR2D2Q9H210 308 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 RAB18Q9NP72 206 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 CLDN16Q9Y5I7 305 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 A0A1W2PP11 408 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 PLA2G10O15496 165 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 SSX4O60224 188 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 HRASP01112 189 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 GNB1P62873 340 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 FAHD2BQ6P2I3 314 aaPredicted RBP13.04□□□□□ -0.32
USP47-207ENST00000527733 TCTE3Q8IZS6 198 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 TMEM123Q8N131 208 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 FAHD2AQ96GK7 314 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 SLC35E1Q96K37 410 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 ZNF251Q9BRH9 671 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 GPR37O15354 613 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 EFNA2O43921 213 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 NSUN5P2Q63ZY6 315 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 TMEM171Q8WVE6 324 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 RPEQ96AT9 228 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 OR2V2Q96R30 315 aa13.04□□□□□ -0.32
USP47-207ENST00000527733 C3orf85A0A1B0GTC6 90 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 IAPPP10997 89 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 KLF9Q13886 244 aaPredicted RBP13.03□□□□□ -0.32
USP47-207ENST00000527733 C1orf162Q8NEQ5 155 aaPredicted RBP13.03□□□□□ -0.32
USP47-207ENST00000527733 GLRX5Q86SX6 157 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 SPICQ8N5J4 248 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 OR8B3Q8NGG8 313 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 ZNF837Q96EG3 531 aaPredicted RBP13.03□□□□□ -0.32
USP47-207ENST00000527733 OR8B2Q96RD0 313 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 CISD1Q9NZ45 108 aaKnown RBP13.03□□□□□ -0.32
USP47-207ENST00000527733 WIPI2Q9Y4P8 454 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 PPIAL4EA0A075B759 164 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 PPIAL4DF5H284 164 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 FCGR3BO75015 233 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 PPIAL4FP0DN26 164 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 PMELP40967 661 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 PRRX1P54821 245 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 VMA21Q3ZAQ7 101 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 ASCL5Q7RTU5 278 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 HOGA1Q86XE5 327 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 SCARB1Q8WTV0 552 aa13.03□□□□□ -0.32
USP47-207ENST00000527733 PKIBQ9C010 78 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms