RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 OR2T27Q8NH04 317 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 DOK4Q8TEW6 326 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF418Q8TF45 676 aaPredicted RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 FCAMRQ8WWV6 532 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 PSMF1Q92530 271 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 NDRG1Q92597 394 aaKnown RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 PPCDCQ96CD2 204 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 SLAMF6Q96DU3 332 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 SEH1LQ96EE3 360 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TVP23CQ96ET8 276 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF582Q96NG8 517 aaPredicted RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ZFP3Q96NJ6 502 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 MS4A10Q96PG2 267 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 NPY6RQ99463 290 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 OR11A1Q9GZK7 315 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 CTDSP1Q9GZU7 261 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC25A51Q9H1U9 297 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 PATZ1Q9HBE1 687 aaKnown RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TAF9BQ9HBM6 251 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM9BQ9NQ34 198 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 HCFC1R1Q9NWW0 138 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM160Q9NX00 188 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 MRPL15Q9P015 296 aaKnown RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ONECUT1Q9UBC0 465 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF107Q9UII5 783 aaPredicted RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 FBXW11Q9UKB1 542 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ERG28Q9UKR5 140 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TRAPPC2LQ9UL33 140 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC7A7Q9UM01 511 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 UFC1Q9Y3C8 167 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 WDR45Q9Y484 360 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 YIPF1Q9Y548 306 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TSSC4Q9Y5U2 329 aaPredicted RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 NHSQ6T4R5 1651 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF106Q9H2Y7 1883 aaKnown RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ANKRD36A6QL64 1941 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 SCN8AQ9UQD0 1980 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 ANK1P16157 1881 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 LOC102724200A0A096LPH7 203 aaPredicted RBP3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 TRAV1-2A0A0B4J238 106 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM189A5PLL7 270 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 H0Y980 276 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 H3BQ15 152 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 M0QXV9 152 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 M0QYG6 137 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 GAPDHSO14556 408 aaPredicted RBP3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 TAX1BP3O14907 124 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 P2RX6O15547 441 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 TRAF3IP2O43734 574 aaPredicted RBP3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 DUX1O43812 170 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 RAMP1O60894 148 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 HYPMO75409 117 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 CNMDO75829 334 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 WISP3O95389 354 aaPredicted RBP3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM50AO95807 157 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 HBZP02008 142 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 MAS1P04201 325 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 SERPINA7P05543 415 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 CTSLP07711 333 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 RAB40ALP0C0E4 278 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 LINC00032P0C843 101 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 UROSP10746 265 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 PSG2P11465 335 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 LAMP2P13473 410 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 EPORP19235 508 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 ELAVL4P26378 380 aaKnown RBP3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 TSPOP30536 169 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 PPICP45877 212 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 NPBWR2P48146 333 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 PRLHRP49683 370 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 GNG4P50150 75 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 DUSP3P51452 185 aaPredicted RBP3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 MFAP4P55083 255 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 FAM3BP58499 235 aaPredicted RBP3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 BTN3A2P78410 334 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 CYCSP99999 105 aaKnown RBP3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 SSBP1Q04837 148 aaKnown RBP3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM267Q0VDI3 215 aaPredicted RBP3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 TAF13Q15543 124 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 EXT1Q16394 746 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 HIST3H3Q16695 136 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 IAH1Q2TAA2 248 aaPredicted RBP3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM128Q5BJH2 165 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 C6orf136Q5SQH8 315 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 FAM78BQ5VT40 261 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC8B1Q6J4K2 584 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 UFSP1Q6NVU6 142 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 CEACAM20Q6UY09 585 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 Q6ZN92 141 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 GTF2H5Q6ZYL4 71 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 Q7L0L9 218 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC16A9Q7RTY1 509 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 GPSM1Q86YR5 675 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 C1orf174Q8IYL3 243 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF101Q8IZC7 436 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC39A11Q8N1S5 342 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 DEFB125Q8N687 156 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 TEX26Q8N6G2 289 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 TCEANCQ8N8B7 351 aa3.18□□□□□ -1.9
CLNS1A-209ENST00000527299 CADM4Q8NFZ8 388 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms