RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 FAM90A22PA8MWA6 464 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 DEGS1O15121 323 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 OGG1O15527 345 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 HCKP08631 526 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 CGB3P0DN86 165 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 CGB7P0DN87 165 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 ZNF44P15621 663 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 DYNLT3P51808 116 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 ADARB1P78563 741 aaKnown RBP8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 DOC2BQ14184 412 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 ZSCAN26Q16670 478 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 C17orf58Q2M2W7 97 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 ELP2Q6IA86 826 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 RPL22L1Q6P5R6 122 aaKnown RBP8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 HEPN1Q6WQI6 88 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 ASCL4Q6XD76 172 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 LIAT1Q6ZQX7 453 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 TRAPPC6BQ86SZ2 158 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 ABHD12Q8N2K0 398 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 KLHDC1Q8N7A1 406 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 ZNF485Q8NCK3 441 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 ZNF555Q8NEP9 628 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 OR13C5Q8NGS8 318 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 OR10K1Q8NGX5 313 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 FAM110DQ8TAY7 271 aaPredicted RBP8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 WIPF2Q8TF74 440 aaPredicted RBP8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 TSEN15Q8WW01 171 aaKnown RBP8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 FOXRED1Q96CU9 486 aaPredicted RBP8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 RDH12Q96NR8 316 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 NR1H4Q96RI1 486 aaPredicted RBP8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 MYCBPQ99417 103 aaPredicted RBP8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 CLEC7AQ9BXN2 247 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 NPFFR1Q9GZQ6 430 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 PPIL3Q9H2H8 161 aaKnown RBP8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 RHOFQ9HBH0 211 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 GLS2Q9UI32 602 aa8.39□□□□□ -1.07
PRPF40B-204ENST00000527253 TGP01266 2768 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 TET2Q6N021 2002 aaPredicted RBP8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 TRGV10A0A0A0MS01 117 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 ODAMA1E959 279 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 IGLV1-47P01700 117 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 CSN2P05814 226 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 RPSAP08865 295 aaKnown RBP8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 VSIG10L2P0DP72 767 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 RAB3AP20336 220 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 CDK2P24941 298 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 DCKP27707 260 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 OR3A4PP47883 348 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 MTNR1BP49286 362 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 BLCAPP62952 87 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 SLC34A1Q06495 639 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 ATXN7L3Q14CW9 347 aaPredicted RBP8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 MINOS1Q5TGZ0 78 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 SATL1Q86VE3 508 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 CHST4Q8NCG5 386 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 Q8NFD4 153 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 PXT1Q8NFP0 134 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 OR2T6Q8NHC8 308 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 NDNFQ8TB73 568 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 TNFAIP8L1Q8WVP5 186 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 CYGBQ8WWM9 190 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 GGHQ92820 318 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 CDCA4Q9BXL8 241 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 ZNF286AQ9HBT8 521 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 RAB18Q9NP72 206 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 BABAM2Q9NXR7 383 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 TAS2R3Q9NYW6 316 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 DIMT1Q9UNQ2 313 aaKnown RBP8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 MINOS1-NBL1R4GNA1 71 aa8.38□□□□□ -1.07
PRPF40B-204ENST00000527253 TRBV5-5A0A0J9YX44 114 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 H0YJX3 145 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 LY6LH3BQJ8 138 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 HSPB6O14558 160 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 CDRT1O95170 752 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 ALDOBP05062 364 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 CD28P10747 220 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 IGFBP3P17936 291 aaPredicted RBP8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 CD24P25063 80 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 HTR1DP28221 377 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 CD34P28906 385 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 RPS11P62280 158 aaKnown RBP eCLIP8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 BDH1Q02338 343 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 PIGYQ3MUY2 71 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 CCDC58Q4VC31 144 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 PDLIM3Q53GG5 364 aaPredicted RBP8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 KRBOX4Q5JUW0 171 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 DMKNQ6E0U4 476 aaPredicted RBP8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 Q6ZTK2 550 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 C1QL4Q86Z23 238 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 LYG1Q8N1E2 194 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 ZFP41Q8N8Y5 198 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 OR51T1Q8NGJ9 327 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 OR13A1Q8NGR1 328 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 PLPPR1Q8TBJ4 325 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 HAVCR2Q8TDQ0 301 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 GPR148Q8TDV2 347 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 STMN2Q93045 179 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 GAL3ST2Q9H3Q3 398 aa8.37□□□□□ -1.07
PRPF40B-204ENST00000527253 ABCB10Q9NRK6 738 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms