RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 OR5AP2Q8NGF4 316 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 TERB2Q8NHR7 220 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 MARS2Q96GW9 593 aaKnown RBP13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 SCGB3A2Q96PL1 93 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 SULT4A1Q9BR01 284 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 PKIBQ9C010 78 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 ANKRD11Q6UB99 2663 aaPredicted RBP13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 TEX46H3BTG2 121 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 TSPAN4O14817 238 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 DUS4LO95620 317 aaKnown RBP13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 CTRB1P17538 263 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 ATF4P18848 351 aaPredicted RBP13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 IL24Q13007 206 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 BTN1A1Q13410 526 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 CTRB2Q6GPI1 263 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 MAFIPQ8WZ33 124 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 S100PBPQ96BU1 408 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 MUCL1Q96DR8 90 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 VRK1Q99986 396 aaPredicted RBP13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 AIFM2Q9BRQ8 373 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 OR51I2Q9H344 312 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 PIGMQ9H3S5 423 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 PLK3Q9H4B4 646 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 ZNF581Q9P0T4 197 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 TUBD1Q9UJT1 453 aa13.85□□□□□ -0.19
SNRNP35-204ENST00000527158 CEP295Q9C0D2 2601 aa13.84□□□□□ -0.19
SNRNP35-204ENST00000527158 SYNGR1O43759 233 aa13.84□□□□□ -0.19
SNRNP35-204ENST00000527158 BMP5P22003 454 aa13.84□□□□□ -0.19
SNRNP35-204ENST00000527158 DTYMKP23919 212 aa13.84□□□□□ -0.19
SNRNP35-204ENST00000527158 PMELP40967 661 aa13.84□□□□□ -0.19
SNRNP35-204ENST00000527158 ADAT1Q9BUB4 502 aaKnown RBP13.84□□□□□ -0.19
SNRNP35-204ENST00000527158 ZNF442Q9H7R0 627 aa13.84□□□□□ -0.19
SNRNP35-204ENST00000527158 ASF1BQ9NVP2 202 aa13.84□□□□□ -0.19
SNRNP35-204ENST00000527158 INTS1Q8N201 2190 aaKnown RBP13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 IGHV2OR16-5A0A0B4J2B6 119 aa13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 OR2AT4A6NND4 320 aa13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 A8MXE2 369 aa13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 NUDT19A8MXV4 375 aa13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 RBPJQ06330 500 aa13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 ZNF273Q14593 569 aa13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 PDCD1Q15116 288 aa13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 PAN3Q58A45 887 aaKnown RBP13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 BRICD5Q6PL45 260 aa13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 PPP1R1CQ8WVI7 109 aa13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 HDHD3Q9BSH5 251 aaPredicted RBP13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 EHFQ9NZC4 300 aa13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 ZNF835Q9Y2P0 537 aa13.83□□□□□ -0.19
SNRNP35-204ENST00000527158 A0A0B4J2A0 478 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 LRP5LA4QPB2 252 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 EEF1E1-BLOC1S5C9J1V9 151 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 J3QT63 122 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 GCH1P30793 250 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 MPV17P39210 176 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 PPP1R1AQ13522 171 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 OR8G1Q15617 311 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 MPV17LQ2QL34 196 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 ZNF718Q3SXZ3 478 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 MRGPRFQ96AM1 343 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 ARPC5LQ9BPX5 153 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 TMEM100Q9NV29 134 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 SHPKQ9UHJ6 478 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 TINAGQ9UJW2 476 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 PRELID1Q9Y255 219 aa13.83□□□□□ -0.2
SNRNP35-204ENST00000527158 RAB19A4D1S5 217 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 F8VVB4 439 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 F8VWA3 439 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 ZNF83P51522 516 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 ALKBH6Q3KRA9 238 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 FAM76BQ5HYJ3 339 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 ALKBH2Q6NS38 261 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 OR8G5Q8NG78 346 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 ZNF471Q9BX82 626 aaPredicted RBP13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 NMES1Q9C002 83 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 RHOFQ9HBH0 211 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 TAS2R3Q9NYW6 316 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 COQ3Q9NZJ6 369 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 ANXA10Q9UJ72 324 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 PURGQ9UJV8 347 aaKnown RBP13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 BOD1L1Q8NFC6 3051 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 SPENQ96T58 3664 aaKnown RBP13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 A0A0G2JNJ9 132 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 SDCBPO00560 298 aaPredicted RBP13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 FCGR3AP08637 254 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 PRKACAP17612 351 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 NAAAQ02083 359 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 SNTB1Q13884 538 aaKnown RBP13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 C3orf36Q3SXR2 165 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 PRR30Q53SZ7 412 aaPredicted RBP13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 MRGPRGQ86SM5 289 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 LINC00596Q86U02 117 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 OR5T2Q8NGG2 359 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 STOML3Q8TAV4 291 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 MARCH1Q8TCQ1 289 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 Q9UFV3 132 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 POLDIP2Q9Y2S7 368 aa13.82□□□□□ -0.2
SNRNP35-204ENST00000527158 DMXL2Q8TDJ6 3036 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 RNF222A6NCQ9 220 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 CEACAM18A8MTB9 384 aa13.81□□□□□ -0.2
SNRNP35-204ENST00000527158 TRIM77I1YAP6 450 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms