RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 FUOMA2VDF0 154 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 ZNF729A6NN14 1252 aaPredicted RBP12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 PRR23D1E9PI22 279 aaPredicted RBP12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 PRR23D2P0DMB1 279 aaPredicted RBP12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 DUSP1P28562 367 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 NPBWR2P48146 333 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 MTNR1BP49286 362 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 FUT6P51993 359 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 MADCAM1Q13477 382 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 HES1Q14469 280 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 MICAQ29983 383 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 LHFPL2Q6ZUX7 228 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 FAM58AQ8N1B3 248 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 OR4D6Q8NGJ1 314 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 OR1N2Q8NGR9 330 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 TRMT10AQ8TBZ6 339 aaKnown RBP12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 EAF1Q96JC9 268 aaPredicted RBP12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 NIPSNAP1Q9BPW8 284 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 COMMD4Q9H0A8 199 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 COPS3Q9UNS2 423 aa12.57□□□□□ -0.4
CHMP4A-203ENST00000527154 KBTBD11-OT1A0A1B0GTJ5 212 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 MAGEA13PA6NCF6 341 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 RBMY1BA6NDE4 496 aaKnown RBP12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 RBMY1EA6NEQ0 496 aaKnown RBP12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 A6NIN4 97 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 OVOL1O14753 267 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 ARPC2O15144 300 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 RBMY1DP0C7P1 496 aaKnown RBP12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 PPIFP30405 207 aaKnown RBP12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 RIDAP52758 137 aaKnown RBP12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 AESQ08117 197 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 ZNF816Q0VGE8 651 aaPredicted RBP12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 RBM39Q14498 530 aaKnown RBP12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 ZNF491Q8N8L2 437 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 BBS1Q8NFJ9 593 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 TEX47Q8TBZ9 253 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 ASB17Q8WXJ9 295 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 DCUN1D4Q92564 292 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 OTULINQ96BN8 352 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 HRASLS5Q96KN8 279 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 NSMCE2Q96MF7 247 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 SPATA25Q9BR10 227 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 CHCHD6Q9BRQ6 235 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 CHST5Q9GZS9 411 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 GNB4Q9HAV0 340 aa12.56□□□□□ -0.4
CHMP4A-203ENST00000527154 FAM230AA0A1W2PPH8 454 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 RRP9O43818 475 aaKnown RBP12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 OR2H2O95918 312 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 GNB1P62873 340 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 HNF4GQ14541 408 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 ACSM6Q6P461 480 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 OR6Q1Q8NGQ2 317 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 HAVCR2Q8TDQ0 301 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 HSPB9Q9BQS6 159 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 NCOR1P1Q9H4R4 102 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 HMG20AQ9NP66 347 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 OR52A1Q9UKL2 312 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 PSG11Q9UQ72 335 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 R4GMQ9 66 aa12.55□□□□□ -0.4
CHMP4A-203ENST00000527154 NPIPB11E5RHQ5 1161 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 LOC110117498-PIK3R3F6TDL0 507 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 MPZL2O60487 215 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 IGLV1-40P01703 118 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 BCL3P20749 454 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 PPP1R8Q12972 351 aaKnown RBP12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 CPOQ8IVL8 374 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 TMEM104Q8NE00 496 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 DNAAF1Q8NEP3 725 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 KCTD7Q96MP8 289 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 KLK15Q9H2R5 256 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 TPSG1Q9NRR2 321 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 CHCHD3Q9NX63 227 aaKnown RBP12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 VSIG4Q9Y279 399 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 TMEM14AQ9Y6G1 99 aa12.54□□□□□ -0.4
CHMP4A-203ENST00000527154 CCDC182A6NF36 153 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 SIRPB1O00241 398 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 SAP30O75446 220 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 PRDX6P30041 224 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 CDK5Q00535 292 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 PAX5Q02548 391 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 Q6P435 159 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 SLC16A12Q6ZSM3 486 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 IL17DQ8TAD2 202 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 LINC00476Q8WZB0 136 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 MNTQ99583 582 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 EXOSC4Q9NPD3 245 aaKnown RBP12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 OR6C3Q9NZP0 311 aa12.53□□□□□ -0.4
CHMP4A-203ENST00000527154 IGHV1-3A0A0C4DH29 117 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 FAM90A10PA6NDY2 464 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 SH2D1BO14796 132 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 GATBO75879 557 aaKnown RBP12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 OR5H8P0DN80 308 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 PRKACAP17612 351 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 VDAC1P21796 283 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 HAGHQ16775 308 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 BCL2L15Q5TBC7 163 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 CHST4Q8NCG5 386 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 OR8H1Q8NGG4 311 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 ST6GALNAC6Q969X2 333 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms