RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 TMBIM4Q9HC24 238 aa2.55□□□□□ -2
CD44-223ENST00000526553 C12orf4Q9NQ89 552 aa2.55□□□□□ -2
CD44-223ENST00000526553 TMEM100Q9NV29 134 aa2.55□□□□□ -2
CD44-223ENST00000526553 MAT2BQ9NZL9 334 aa2.55□□□□□ -2
CD44-223ENST00000526553 NRXN2Q9P2S2 1712 aa2.55□□□□□ -2
CD44-223ENST00000526553 MRM2Q9UI43 246 aaKnown RBP2.55□□□□□ -2
CD44-223ENST00000526553 ANXA10Q9UJ72 324 aa2.55□□□□□ -2
CD44-223ENST00000526553 IGSF9BQ9UPX0 1349 aa2.55□□□□□ -2
CD44-223ENST00000526553 POFUT2Q9Y2G5 429 aa2.55□□□□□ -2
CD44-223ENST00000526553 PPIL1Q9Y3C6 166 aa2.55□□□□□ -2
CD44-223ENST00000526553 LRRC42Q9Y546 428 aa2.55□□□□□ -2
CD44-223ENST00000526553 ORC6Q9Y5N6 252 aa2.55□□□□□ -2
CD44-223ENST00000526553 RFNGQ9Y644 331 aa2.55□□□□□ -2
CD44-223ENST00000526553 CEP290O15078 2479 aa2.54□□□□□ -2
CD44-223ENST00000526553 KIAA0100Q14667 2235 aaKnown RBP2.54□□□□□ -2
CD44-223ENST00000526553 ADAMTS7Q9UKP4 1686 aa2.54□□□□□ -2
CD44-223ENST00000526553 IGHV3-49A0A0A0MS15 119 aa2.54□□□□□ -2
CD44-223ENST00000526553 GOLGA8IPA6NC78 632 aa2.54□□□□□ -2
CD44-223ENST00000526553 CETN3O15182 167 aa2.54□□□□□ -2
CD44-223ENST00000526553 ADRA2AP08913 450 aa2.54□□□□□ -2
CD44-223ENST00000526553 NQO2P16083 231 aa2.54□□□□□ -2
CD44-223ENST00000526553 KIR3DL2P43630 455 aa2.54□□□□□ -2
CD44-223ENST00000526553 MAP3K7CLP57077 242 aa2.54□□□□□ -2
CD44-223ENST00000526553 PPP1CAP62136 330 aa2.54□□□□□ -2
CD44-223ENST00000526553 IL5RAQ01344 420 aa2.54□□□□□ -2
CD44-223ENST00000526553 ADIGQ0VDE8 80 aa2.54□□□□□ -2
CD44-223ENST00000526553 SYCP1Q15431 976 aa2.54□□□□□ -2
CD44-223ENST00000526553 PDPK2PQ6A1A2 396 aa2.54□□□□□ -2
CD44-223ENST00000526553 ZFP1Q6P2D0 407 aa2.54□□□□□ -2
CD44-223ENST00000526553 IGFL1Q6UW32 110 aa2.54□□□□□ -2
CD44-223ENST00000526553 FAM19A1Q7Z5A9 133 aa2.54□□□□□ -2
CD44-223ENST00000526553 MRPL52Q86TS9 123 aaKnown RBP2.54□□□□□ -2
CD44-223ENST00000526553 ATPAF2Q8N5M1 289 aa2.54□□□□□ -2
CD44-223ENST00000526553 C17orf50Q8WW18 174 aa2.54□□□□□ -2
CD44-223ENST00000526553 SERPINB11Q96P15 392 aa2.54□□□□□ -2
CD44-223ENST00000526553 CATSPER2Q96P56 530 aa2.54□□□□□ -2
CD44-223ENST00000526553 DOK1Q99704 481 aa2.54□□□□□ -2
CD44-223ENST00000526553 NUDT9Q9BW91 350 aa2.54□□□□□ -2
CD44-223ENST00000526553 ABCB9Q9NP78 766 aa2.54□□□□□ -2
CD44-223ENST00000526553 ZNHIT6Q9NWK9 470 aaKnown RBP2.54□□□□□ -2
CD44-223ENST00000526553 DNAJC27Q9NZQ0 273 aa2.54□□□□□ -2
CD44-223ENST00000526553 OPN4Q9UHM6 478 aa2.54□□□□□ -2
CD44-223ENST00000526553 PRO0628Q9UI54 55 aa2.54□□□□□ -2
CD44-223ENST00000526553 USH1CQ9Y6N9 552 aa2.54□□□□□ -2
CD44-223ENST00000526553 ADAMTSL1Q8N6G6 1762 aa2.54□□□□□ -2
CD44-223ENST00000526553 DOCK9Q9BZ29 2069 aa2.53□□□□□ -2
CD44-223ENST00000526553 COL1A2P08123 1366 aa2.53□□□□□ -2
CD44-223ENST00000526553 PCM1Q15154 2024 aa2.53□□□□□ -2
CD44-223ENST00000526553 CCL15-CCL14A0A0B4J2E2 113 aa2.53□□□□□ -2
CD44-223ENST00000526553 ISPDA4D126 451 aa2.53□□□□□ -2
CD44-223ENST00000526553 C5orf63A6NC05 138 aa2.53□□□□□ -2
CD44-223ENST00000526553 CRXO43186 299 aaPredicted RBP2.53□□□□□ -2
CD44-223ENST00000526553 CCNE2O96020 404 aa2.53□□□□□ -2
CD44-223ENST00000526553 OR4Q2P0C623 313 aa2.53□□□□□ -2
CD44-223ENST00000526553 HLA-GP17693 338 aa2.53□□□□□ -2
CD44-223ENST00000526553 IL3RAP26951 378 aa2.53□□□□□ -2
CD44-223ENST00000526553 RPA3P35244 121 aaPredicted RBP2.53□□□□□ -2
CD44-223ENST00000526553 RAB38P57729 211 aa2.53□□□□□ -2
CD44-223ENST00000526553 PIGHQ14442 188 aaPredicted RBP2.53□□□□□ -2
CD44-223ENST00000526553 PRSS8Q16651 343 aa2.53□□□□□ -2
CD44-223ENST00000526553 CCL15Q16663 113 aa2.53□□□□□ -2
CD44-223ENST00000526553 ATP6AP1LQ52LC2 224 aa2.53□□□□□ -2
CD44-223ENST00000526553 CST9Q5W186 159 aa2.53□□□□□ -2
CD44-223ENST00000526553 HBMQ6B0K9 141 aa2.53□□□□□ -2
CD44-223ENST00000526553 ZNF470Q6ECI4 717 aa2.53□□□□□ -2
CD44-223ENST00000526553 MTERF4Q7Z6M4 381 aaKnown RBP2.53□□□□□ -2
CD44-223ENST00000526553 LRRC6Q86X45 466 aa2.53□□□□□ -2
CD44-223ENST00000526553 BBS7Q8IWZ6 715 aa2.53□□□□□ -2
CD44-223ENST00000526553 SPICQ8N5J4 248 aa2.53□□□□□ -2
CD44-223ENST00000526553 ZNF645Q8N7E2 425 aa2.53□□□□□ -2
CD44-223ENST00000526553 OR8G5Q8NG78 346 aa2.53□□□□□ -2
CD44-223ENST00000526553 OR5M1Q8NGP8 315 aa2.53□□□□□ -2
CD44-223ENST00000526553 PDCD6IPQ8WUM4 868 aaKnown RBP2.53□□□□□ -2
CD44-223ENST00000526553 GTF2H4Q92759 462 aa2.53□□□□□ -2
CD44-223ENST00000526553 FRZBQ92765 325 aa2.53□□□□□ -2
CD44-223ENST00000526553 HGDQ93099 445 aa2.53□□□□□ -2
CD44-223ENST00000526553 LRRC45Q96CN5 670 aa2.53□□□□□ -2
CD44-223ENST00000526553 L3HYPDHQ96EM0 354 aa2.53□□□□□ -2
CD44-223ENST00000526553 OR10C1Q96KK4 312 aa2.53□□□□□ -2
CD44-223ENST00000526553 C18orf15Q96N68 181 aa2.53□□□□□ -2
CD44-223ENST00000526553 METTL26Q96S19 204 aa2.53□□□□□ -2
CD44-223ENST00000526553 TBL1XR1Q9BZK7 514 aa2.53□□□□□ -2
CD44-223ENST00000526553 SHCBP1LQ9BZQ2 653 aa2.53□□□□□ -2
CD44-223ENST00000526553 TSGA10Q9BZW7 698 aa2.53□□□□□ -2
CD44-223ENST00000526553 DDIT4Q9NX09 232 aa2.53□□□□□ -2
CD44-223ENST00000526553 CYB5R1Q9UHQ9 305 aa2.53□□□□□ -2
CD44-223ENST00000526553 TRIOBPQ9H2D6 2365 aa2.53□□□□□ -2
CD44-223ENST00000526553 KIF24Q5T7B8 1368 aa2.52□□□□□ -2.01
CD44-223ENST00000526553 TONSLQ96HA7 1378 aa2.52□□□□□ -2.01
CD44-223ENST00000526553 NUP98P52948 1817 aa2.52□□□□□ -2.01
CD44-223ENST00000526553 BCORQ6W2J9 1755 aa2.52□□□□□ -2.01
CD44-223ENST00000526553 PAPPA2Q9BXP8 1791 aa2.52□□□□□ -2.01
CD44-223ENST00000526553 A0A0G2JMP0 313 aa2.52□□□□□ -2.01
CD44-223ENST00000526553 A0A0X1KG70 313 aa2.52□□□□□ -2.01
CD44-223ENST00000526553 UPK2O00526 184 aa2.52□□□□□ -2.01
CD44-223ENST00000526553 UBDO15205 165 aa2.52□□□□□ -2.01
CD44-223ENST00000526553 ENSAO43768 121 aaKnown RBP2.52□□□□□ -2.01
CD44-223ENST00000526553 IGLV2-8P01709 118 aa2.52□□□□□ -2.01
CD44-223ENST00000526553 IGLV3-25P01717 112 aa2.52□□□□□ -2.01
CD44-223ENST00000526553 CD5P06127 495 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms