RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 LOXL1Q08397 574 aaPredicted RBP5.36□□□□□ -1.55
CD44-214ENST00000525211 MZT1Q08AG7 82 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 ZNF146Q15072 292 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 RSU1Q15404 277 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 MICBQ29980 383 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 TMEM249Q2WGJ8 235 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 TMEM155Q4W5P6 130 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 PLAC9Q5JTB6 97 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 ATPAF1Q5TC12 328 aaPredicted RBP5.36□□□□□ -1.55
CD44-214ENST00000525211 WDR25Q64LD2 544 aaPredicted RBP5.36□□□□□ -1.55
CD44-214ENST00000525211 GDPGP1Q6ZNW5 385 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 DCDC5Q6ZRR9 648 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 Q71RC1 249 aaPredicted RBP5.36□□□□□ -1.55
CD44-214ENST00000525211 TPRA1Q86W33 373 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 CDH26Q8IXH8 852 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 IZUMO1Q8IYV9 350 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 C1orf87Q8N0U7 546 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 NKAIN3Q8N8D7 197 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 OR51T1Q8NGJ9 327 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 OR6M1Q8NGM8 313 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 UBALD1Q8TB05 177 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 SLC25A46Q96AG3 418 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 SDSLQ96GA7 329 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 C1orf159Q96HA4 380 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 SLITRK2Q9H156 845 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 PPA2Q9H2U2 334 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 PLGRKTQ9HBL7 147 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 MYOZ1Q9NP98 299 aaPredicted RBP5.36□□□□□ -1.55
CD44-214ENST00000525211 C19orf12Q9NSK7 152 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 PCDHB10Q9UN67 800 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 ST3GAL6Q9Y274 331 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 POLDIP2Q9Y2S7 368 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 SOX21Q9Y651 276 aaPredicted RBP5.36□□□□□ -1.55
CD44-214ENST00000525211 F8P00451 2351 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 NAV3Q8IVL0 2385 aa5.36□□□□□ -1.55
CD44-214ENST00000525211 TRAV38-1A0A0B4J264 116 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 UBE2QL1A1L167 161 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 LRRC30A6NM36 301 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 RAB27BO00194 218 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 NDUFS8O00217 210 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 CTDSP2O14595 271 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 PDCD5O14737 125 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 HPGDSO60760 199 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 MMP23AO75900 390 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 LY6G6DO95868 133 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 TK1P04183 234 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 CSF3P09919 207 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 RPS2P15880 293 aaKnown RBP5.35□□□□□ -1.55
CD44-214ENST00000525211 MUC1P15941 1255 aaPredicted RBP5.35□□□□□ -1.55
CD44-214ENST00000525211 GABRR1P24046 479 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 LMO1P25800 156 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 CHATP28329 748 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 GLIPR1P48060 266 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 PITPNBP48739 271 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 VEGFCP49767 419 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 DSCR9P59020 149 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 AESQ08117 197 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 ZNF273Q14593 569 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 NHLRC3Q5JS37 347 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 SPNS3Q6ZMD2 512 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 C6orf201Q7Z4U5 140 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 CMTM4Q8IZR5 234 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 FAM89BQ8N5H3 189 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 C11orf42Q8N5U0 333 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 SUMF2Q8NBJ7 301 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 ST8SIA4Q92187 359 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 THRSPQ92748 146 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 GCDHQ92947 438 aaPredicted RBP5.35□□□□□ -1.55
CD44-214ENST00000525211 FOXRED1Q96CU9 486 aaPredicted RBP5.35□□□□□ -1.55
CD44-214ENST00000525211 NEIL1Q96FI4 390 aaPredicted RBP5.35□□□□□ -1.55
CD44-214ENST00000525211 SULT4A1Q9BR01 284 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 DCUN1D5Q9BTE7 237 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 FAAP24Q9BTP7 215 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 TM2D1Q9BX74 207 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 SLIRPQ9GZT3 109 aaKnown RBP5.35□□□□□ -1.55
CD44-214ENST00000525211 ZMAT3Q9HA38 289 aaKnown RBP5.35□□□□□ -1.55
CD44-214ENST00000525211 RASL12Q9NYN1 266 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 KAAG1Q9UBP8 84 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 TLN2Q9Y4G6 2542 aa5.35□□□□□ -1.55
CD44-214ENST00000525211 SONP18583 2426 aaKnown RBP5.34□□□□□ -1.55
CD44-214ENST00000525211 FAM181BA6NEQ2 426 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 CCDC160A6NGH7 325 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 K7N7A8 449 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 DEGS1O15121 323 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 OR7C1O76099 320 aaPredicted RBP5.34□□□□□ -1.55
CD44-214ENST00000525211 FSTL3O95633 263 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 CHRM2P08172 466 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 GTF2F2P13984 249 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 ZNF44P15621 663 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 ARSBP15848 533 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 CCL3L1P16619 93 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 ELK1P19419 428 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 DLX6P56179 175 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 EDDM3AQ14507 147 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 IL13RA2Q14627 380 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 ATXN7L3Q14CW9 347 aaPredicted RBP5.34□□□□□ -1.55
CD44-214ENST00000525211 SMIM21Q3B7S5 101 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 TIMM50Q3ZCQ8 353 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 KIAA2026Q5HYC2 2103 aa5.34□□□□□ -1.55
CD44-214ENST00000525211 RSBN1Q5VWQ0 802 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms