RNA–Protein interactions for RNA: ENST00000523511.1

LSM1-205, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-205ENST00000523511 OR6C3Q9NZP0 311 aa13.27□□□□□ -0.29
LSM1-205ENST00000523511 IL36RNQ9UBH0 155 aa13.27□□□□□ -0.29
LSM1-205ENST00000523511 ING4Q9UNL4 249 aa13.27□□□□□ -0.29
LSM1-205ENST00000523511 SESN1Q9Y6P5 492 aa13.27□□□□□ -0.29
LSM1-205ENST00000523511 H3BUX3 64 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 XPNPEP2O43895 674 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 GNAO1P09471 354 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 OR3A1P47881 315 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 KCNJ3P48549 501 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 ARHGDIBP52566 201 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 DLX6P56179 175 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 IL13RA2Q14627 380 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 KRBOX4Q5JUW0 171 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 DDI2Q5TDH0 399 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 MINOS1Q5TGZ0 78 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 XAF1Q6GPH4 301 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 RTN4RL2Q86UN3 420 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 OR4D6Q8NGJ1 314 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 CORO2AQ92828 525 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 CREB3L1Q96BA8 519 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 CDCA4Q9BXL8 241 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 PITPNC1Q9UKF7 332 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 TPRKBQ9Y3C4 175 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 RNF114Q9Y508 228 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 MINOS1-NBL1R4GNA1 71 aa13.26□□□□□ -0.29
LSM1-205ENST00000523511 PTGES3LE9PB15 166 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 GABRPO00591 440 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 GPX5O75715 221 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 HTR3BO95264 441 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 CELP19835 753 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 C21orf33P30042 268 aaPredicted RBP13.25□□□□□ -0.29
LSM1-205ENST00000523511 BDH1Q02338 343 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 AESQ08117 197 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 C6orf141Q5SZD1 244 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 RNLSQ5VYX0 342 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 ASCL4Q6XD76 172 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 LINC00596Q86U02 117 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 CDH26Q8IXH8 852 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 MS4A15Q8N5U1 240 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 NANOGP1Q8N7R0 232 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 TPRX1Q8N7U7 411 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 OR51T1Q8NGJ9 327 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 ZNF596Q8TC21 504 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 RGP1Q92546 391 aaPredicted RBP13.25□□□□□ -0.29
LSM1-205ENST00000523511 MND1Q9BWT6 205 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 CLEC7AQ9BXN2 247 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 TMEM133Q9H2Q1 129 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 PPA2Q9H2U2 334 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 NCOR1P1Q9H4R4 102 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 FOXJ3Q9UPW0 622 aa13.25□□□□□ -0.29
LSM1-205ENST00000523511 TRBV5-5A0A0J9YX44 114 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 ODAMA1E959 279 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 FAM90A8PA6NJQ4 464 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 SLC33A1O00400 549 aaPredicted RBP13.24□□□□□ -0.29
LSM1-205ENST00000523511 TOR1AO14656 332 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 CLPXO76031 633 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 GTF2F2P13984 249 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 HSPA13P48723 471 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 PRRX1P54821 245 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 PAN3Q58A45 887 aaKnown RBP13.24□□□□□ -0.29
LSM1-205ENST00000523511 ZNF626Q68DY1 528 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 Q6P435 159 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 C11orf88Q6PI97 169 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 OSR2Q8N2R0 312 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 Q8NFD4 153 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 OR51A2Q8NGJ7 313 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 C16orf95Q9H693 158 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 ZNF696Q9H7X3 374 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 IL36GQ9NZH8 169 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 NKX1-2Q9UD57 310 aaPredicted RBP13.24□□□□□ -0.29
LSM1-205ENST00000523511 ST3GAL6Q9Y274 331 aa13.24□□□□□ -0.29
LSM1-205ENST00000523511 SIRT4Q9Y6E7 314 aaPredicted RBP13.24□□□□□ -0.29
LSM1-205ENST00000523511 MEGF11A6BM72 1044 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 TSPAN9O75954 239 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 LALBAP00709 142 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 CDK1P06493 297 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 HTR1DP28221 377 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 CEACAM3P40198 252 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 GLIPR1P48060 266 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 DOC2BQ14184 412 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 FAM189A2Q15884 450 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 SSX2Q16385 188 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 ASPHD2Q6ICH7 369 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 HEPN1Q6WQI6 88 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 ABHD12Q8N2K0 398 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 ZNF485Q8NCK3 441 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 OR4C13Q8NGP0 309 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 LINC01006Q8NI28 216 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 NDNFQ8TB73 568 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 MRPS24Q96EL2 167 aaKnown RBP13.23□□□□□ -0.29
LSM1-205ENST00000523511 ZNF184Q99676 751 aaPredicted RBP13.23□□□□□ -0.29
LSM1-205ENST00000523511 SPACA1Q9HBV2 294 aa13.23□□□□□ -0.29
LSM1-205ENST00000523511 MEIKINA0A087WXM9 373 aa13.22□□□□□ -0.29
LSM1-205ENST00000523511 IGHV2-26A0A0B4J1V2 119 aa13.22□□□□□ -0.29
LSM1-205ENST00000523511 MEX3AA1L020 520 aaKnown RBP13.22□□□□□ -0.29
LSM1-205ENST00000523511 ZNF729A6NN14 1252 aaPredicted RBP13.22□□□□□ -0.29
LSM1-205ENST00000523511 VGLL3A8MV65 326 aa13.22□□□□□ -0.29
LSM1-205ENST00000523511 IGFBP3P17936 291 aaPredicted RBP13.22□□□□□ -0.29
LSM1-205ENST00000523511 FSTP19883 344 aa13.22□□□□□ -0.29
LSM1-205ENST00000523511 CDK2P24941 298 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms