RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 ADGRB1O14514 1584 aa2.57□□□□□ -2
HMGB1P1-201ENST00000522557 PHRF1Q9P1Y6 1649 aaKnown RBP2.57□□□□□ -2
HMGB1P1-201ENST00000522557 KNDC1Q76NI1 1749 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 PEAK1Q9H792 1746 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 PARP4Q9UKK3 1724 aaKnown RBP2.56□□□□□ -2
HMGB1P1-201ENST00000522557 RAB19A4D1S5 217 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 ERICH4A6NGS2 130 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 C16orf90A8MZG2 172 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 RPL36A-HNRNPH2H7BZ11 118 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 hCG_2039718K7EN88 272 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 FFAR1O14842 300 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 MAGEB4O15481 346 aaPredicted RBP2.56□□□□□ -2
HMGB1P1-201ENST00000522557 RCBTB2O95199 551 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 GP1BAP07359 652 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 OR4Q2P0C623 313 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 ZNF286BP0CG31 522 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 NPY1RP25929 384 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 TEAD1P28347 426 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 GTF2H1P32780 548 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 SPAM1P38567 509 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 TAS2R43P59537 309 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 PPP1CAP62136 330 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 MEF2CQ06413 473 aaPredicted RBP2.56□□□□□ -2
HMGB1P1-201ENST00000522557 ZNF404Q494X3 552 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 CLEC12AQ5QGZ9 265 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 KPRPQ5T749 579 aaPredicted RBP2.56□□□□□ -2
HMGB1P1-201ENST00000522557 RESP18Q5W5W9 173 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 C16orf47Q6ZP98 133 aaPredicted RBP2.56□□□□□ -2
HMGB1P1-201ENST00000522557 STK40Q8N2I9 435 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 ATPAF2Q8N5M1 289 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 TMEM105Q8N8V8 129 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 OR9A2Q8NGT5 310 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 RTN4IP1Q8WWV3 396 aaPredicted RBP2.56□□□□□ -2
HMGB1P1-201ENST00000522557 ING5Q8WYH8 240 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 CCL17Q92583 94 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 RORBQ92753 470 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 TMEM159Q96B96 161 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 BIRC8Q96P09 236 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 RNF157Q96PX1 679 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 GOLPH3Q9H4A6 298 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 TAS2R5Q9NYW4 299 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 ENOPH1Q9UHY7 261 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 PRO0628Q9UI54 55 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 USP42Q9H9J4 1324 aaKnown RBP2.56□□□□□ -2
HMGB1P1-201ENST00000522557 EDC4Q6P2E9 1401 aaKnown RBP2.56□□□□□ -2
HMGB1P1-201ENST00000522557 C10orf71Q711Q0 1435 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 PXDNLA1KZ92 1463 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 LMO7Q8WWI1 1683 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 IFT172Q9UG01 1749 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 SBF2Q86WG5 1849 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 VWA8A3KMH1 1905 aa2.56□□□□□ -2
HMGB1P1-201ENST00000522557 LOC102724200A0A096LPH7 203 aaPredicted RBP2.55□□□□□ -2
HMGB1P1-201ENST00000522557 GOLGA8QA0A0J9YX86 632 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 LINC00854A0A1B0GVQ3 168 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 C7orf66A4D0T2 115 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 RGPD3A6NKT7 1758 aaPredicted RBP2.55□□□□□ -2
HMGB1P1-201ENST00000522557 OR2AT4A6NND4 320 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 SLC35E2BP0CK96 405 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 TGFBR1P36897 503 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 PITPNAQ00169 270 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 LAMTOR4Q0VGL1 99 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 STX3Q13277 289 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 Q499Y3 187 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 IDNKQ5T6J7 187 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 KCTD16Q68DU8 428 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 CLEC18BQ6UXF7 455 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 THADAQ6YHU6 1953 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 TPGS1Q6ZTW0 290 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 USP50Q70EL3 339 aaPredicted RBP2.55□□□□□ -2
HMGB1P1-201ENST00000522557 RGPD4Q7Z3J3 1758 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 TCAIMQ8N3R3 496 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 MIR7-3HGQ8N6C7 128 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 DRAXINQ8NBI3 349 aaPredicted RBP2.55□□□□□ -2
HMGB1P1-201ENST00000522557 FAM57AQ8TBR7 257 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 ABCA3Q99758 1704 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 CIB1Q99828 191 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 ZNF717Q9BY31 904 aaPredicted RBP2.55□□□□□ -2
HMGB1P1-201ENST00000522557 RDH14Q9HBH5 336 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 TREM1Q9NP99 234 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 FBXO6Q9NRD1 293 aaPredicted RBP2.55□□□□□ -2
HMGB1P1-201ENST00000522557 ENPP5Q9UJA9 477 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 ZNF835Q9Y2P0 537 aa2.55□□□□□ -2
HMGB1P1-201ENST00000522557 NUP205Q92621 2012 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 TICRRQ7Z2Z1 1910 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 LRRC37A3O60309 1634 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 ABCC6O95255 1503 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 RTL1A6NKG5 1358 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 FLT4P35916 1363 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 BTNL10A8MVZ5 291 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 IL12BP29460 328 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 OR2B6P58173 313 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 VSNL1P62760 191 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 BAXQ07812 192 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 SLAMF1Q13291 335 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 FAM53BQ14153 422 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 PMVKQ15126 192 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 USF2Q15853 346 aaPredicted RBP2.54□□□□□ -2
HMGB1P1-201ENST00000522557 LY6EQ16553 131 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 CST9Q5W186 159 aa2.54□□□□□ -2
HMGB1P1-201ENST00000522557 HMGN2P46Q86SG4 172 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms