RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 SHARPINQ9H0F6 387 aa13.53□□□□□ -0.24
LSM1-204ENST00000522515 RCC2Q9P258 522 aaKnown RBP13.53□□□□□ -0.24
LSM1-204ENST00000522515 K7N7A8 449 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 PDCD6O75340 191 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 TK1P04183 234 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 FUT3P21217 361 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 FAM189A2Q15884 450 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 PAN3Q58A45 887 aaKnown RBP13.52□□□□□ -0.25
LSM1-204ENST00000522515 NKAPLQ5M9Q1 402 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 RAB12Q6IQ22 244 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 NLRC3Q7RTR2 1065 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 C6orf201Q7Z4U5 140 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 LAX1Q8IWV1 398 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 OR4S1Q8NGB4 309 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 OR8B3Q8NGG8 313 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 OR10R2Q8NGX6 335 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 RAB40AQ8WXH6 277 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 SNX22Q96L94 193 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 CMTM3Q96MX0 182 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 OR8B2Q96RD0 313 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 PPA2Q9H2U2 334 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 MMP27Q9H306 513 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 SPACA1Q9HBV2 294 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 PEX16Q9Y5Y5 336 aa13.52□□□□□ -0.25
LSM1-204ENST00000522515 NDUFB3O43676 98 aa13.51□□□□□ -0.25
LSM1-204ENST00000522515 APOA1P02647 267 aa13.51□□□□□ -0.25
LSM1-204ENST00000522515 OR3A1P47881 315 aa13.51□□□□□ -0.25
LSM1-204ENST00000522515 PLAC9Q5JTB6 97 aa13.51□□□□□ -0.25
LSM1-204ENST00000522515 DTX3Q8N9I9 347 aa13.51□□□□□ -0.25
LSM1-204ENST00000522515 S100A16Q96FQ6 103 aaKnown RBP13.51□□□□□ -0.25
LSM1-204ENST00000522515 ARHGAP5-AS1Q96IT6 56 aa13.51□□□□□ -0.25
LSM1-204ENST00000522515 NEDD4LQ96PU5 975 aa13.51□□□□□ -0.25
LSM1-204ENST00000522515 DPCDQ9BVM2 203 aaPredicted RBP13.51□□□□□ -0.25
LSM1-204ENST00000522515 SLC25A10Q9UBX3 287 aaPredicted RBP13.51□□□□□ -0.25
LSM1-204ENST00000522515 A3GALT2U3KPV4 340 aa13.51□□□□□ -0.25
LSM1-204ENST00000522515 CDK2P24941 298 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 LOXL1Q08397 574 aaPredicted RBP13.5□□□□□ -0.25
LSM1-204ENST00000522515 GRK1Q15835 563 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 LRRC10Q5BKY1 277 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 WDR25Q64LD2 544 aaPredicted RBP13.5□□□□□ -0.25
LSM1-204ENST00000522515 Q6ZTK2 550 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 OR8H2Q8N162 312 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 MAPK1IP1LQ8NDC0 245 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 RAB39BQ96DA2 213 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 RAB3CQ96E17 227 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 SULT4A1Q9BR01 284 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 FAAP24Q9BTP7 215 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 FAM234AQ9H0X4 552 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 PLEKHJ1Q9NW61 149 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 CLN8Q9UBY8 286 aa13.5□□□□□ -0.25
LSM1-204ENST00000522515 UBE2QL1A1L167 161 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 FAM25AB3EWG3 89 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 FAM25CB3EWG5 89 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 FAM25GB3EWG6 89 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 MCRIP1C9JLW8 97 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 H3BUI4 141 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 PHF1O43189 567 aaPredicted RBP13.49□□□□□ -0.25
LSM1-204ENST00000522515 SCGNO76038 276 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 NDUFB7P17568 137 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 ATXN7L3Q14CW9 347 aaPredicted RBP13.49□□□□□ -0.25
LSM1-204ENST00000522515 IZUMO1Q8IYV9 350 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 PPP1R35Q8TAP8 253 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 NEK7Q8TDX7 302 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 ST8SIA4Q92187 359 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 PHF21AQ96BD5 680 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 PECRQ9BY49 303 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 ZMAT3Q9HA38 289 aaKnown RBP13.49□□□□□ -0.25
LSM1-204ENST00000522515 DIABLOQ9NR28 239 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 HSF4Q9ULV5 492 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 KCNK7Q9Y2U2 307 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 FAM157AC9JC47 383 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 GNB3P16520 340 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 GNB2P62879 340 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 MADCAM1Q13477 382 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 ESCO2Q56NI9 601 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 OLFML2AQ68BL7 652 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 CIARTQ8N365 385 aaPredicted RBP13.49□□□□□ -0.25
LSM1-204ENST00000522515 TPRX1Q8N7U7 411 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 OR4M1Q8NGD0 313 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 OR5D13Q8NGL4 314 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 PLPPR1Q8TBJ4 325 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 DYRK2Q92630 601 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 SSBP3Q9BWW4 388 aaPredicted RBP13.49□□□□□ -0.25
LSM1-204ENST00000522515 ING3Q9NXR8 418 aa13.49□□□□□ -0.25
LSM1-204ENST00000522515 MYO9AB2RTY4 2548 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 TRAV18A0A075B6X5 111 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 A0A0A6YYH2 397 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 A6NJ64 397 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 MFNGO00587 321 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 MGST3O14880 152 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 XRCC3O43542 346 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 CLPXO76031 633 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 CSN2P05814 226 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 GLAP06280 429 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 HEXAP06865 529 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 HIST1H1DP16402 221 aaKnown RBP13.48□□□□□ -0.25
LSM1-204ENST00000522515 ZFP36P26651 326 aaKnown RBP13.48□□□□□ -0.25
LSM1-204ENST00000522515 TNFSF8P32971 234 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 NPY4RP50391 375 aa13.48□□□□□ -0.25
LSM1-204ENST00000522515 AESQ08117 197 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms