RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PPIAL4FP0DN26 164 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 PSG2P11465 335 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 IL7P13232 177 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 DUSP1P28562 367 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 CDKN1AP38936 164 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 MDH2P40926 338 aaKnown RBP10.94□□□□□ -0.66
CPNE3-205ENST00000522240 CBX5P45973 191 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 KCNJ3P48549 501 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 EFNA4P52798 201 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 GNG2P59768 71 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 DGCR2P98153 550 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 RBM39Q14498 530 aaKnown RBP10.94□□□□□ -0.66
CPNE3-205ENST00000522240 KCNJ8Q15842 424 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 MICBQ29980 383 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 ATAD3CQ5T2N8 411 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 TRIQKQ629K1 86 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 RTN4RL2Q86UN3 420 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 TGIF2LYQ8IUE0 185 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 BOLLQ8N9W6 283 aaKnown RBP10.94□□□□□ -0.66
CPNE3-205ENST00000522240 ANGPTL6Q8NI99 470 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 FCAMRQ8WWV6 532 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 ZMAT3Q9HA38 289 aaKnown RBP10.94□□□□□ -0.66
CPNE3-205ENST00000522240 MYOZ1Q9NP98 299 aaPredicted RBP10.94□□□□□ -0.66
CPNE3-205ENST00000522240 DCAF16Q9NXF7 216 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 TREM2Q9NZC2 230 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 OR14J1Q9UGF5 321 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 RBMX2Q9Y388 322 aaKnown RBP10.94□□□□□ -0.66
CPNE3-205ENST00000522240 PPIAL4AQ9Y536 164 aa10.94□□□□□ -0.66
CPNE3-205ENST00000522240 IGKV1D-17A0A075B6S4 117 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 TRAV24A0A0B4J272 114 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 RFPL4AA6NLU0 287 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 MCRIP1C9JLW8 97 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 RFPL4AL1F8VTS6 287 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 SLC33A1O00400 549 aaPredicted RBP10.93□□□□□ -0.66
CPNE3-205ENST00000522240 DAOP14920 347 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 DTYMKP23919 212 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 PRDX2P32119 198 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 ACTBP60709 375 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 ACTG1P63261 375 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 HOXA4Q00056 320 aaPredicted RBP10.93□□□□□ -0.66
CPNE3-205ENST00000522240 PAX5Q02548 391 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 PDCD1Q15116 288 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 BAK1Q16611 211 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 PAN3Q58A45 887 aaKnown RBP10.93□□□□□ -0.66
CPNE3-205ENST00000522240 C16orf87Q6PH81 154 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 OR8H2Q8N162 312 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 SUMF2Q8NBJ7 301 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 OR52I2Q8NH67 350 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 NUDCD2Q8WVJ2 157 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 GCDHQ92947 438 aaPredicted RBP10.93□□□□□ -0.66
CPNE3-205ENST00000522240 SEH1LQ96EE3 360 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 SDSLQ96GA7 329 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 SULT4A1Q9BR01 284 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 DPCDQ9BVM2 203 aaPredicted RBP10.93□□□□□ -0.66
CPNE3-205ENST00000522240 CHODLQ9H9P2 273 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 C12orf4Q9NQ89 552 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 MTFP1Q9UDX5 166 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 ZNF107Q9UII5 783 aaPredicted RBP10.93□□□□□ -0.66
CPNE3-205ENST00000522240 AK3Q9UIJ7 227 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 ANAPC10Q9UM13 185 aa10.93□□□□□ -0.66
CPNE3-205ENST00000522240 IGHV3OR15-7A0A075B7D8 119 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 MEIOCA2RUB1 952 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 NKX6-3A6NJ46 265 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 SIRPB1O00241 398 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 SSX5O60225 188 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 CSN2P05814 226 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 CD3GP09693 182 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 PTHLHP12272 177 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 PAX1P15863 534 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 RCVRNP35243 200 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 GDNFP39905 211 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 CEBPDP49716 269 aaPredicted RBP10.92□□□□□ -0.66
CPNE3-205ENST00000522240 BTG1P62324 171 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 MRPS15P82914 257 aaKnown RBP10.92□□□□□ -0.66
CPNE3-205ENST00000522240 COL10A1Q03692 680 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 ARFRP1Q13795 201 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 FAM201AQ5SY85 155 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 ATPAF1Q5TC12 328 aaPredicted RBP10.92□□□□□ -0.66
CPNE3-205ENST00000522240 OLFML2AQ68BL7 652 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 TRAPPC6BQ86SZ2 158 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 PEG10Q86TG7 708 aaKnown RBP10.92□□□□□ -0.66
CPNE3-205ENST00000522240 MUC20Q8N307 709 aaPredicted RBP10.92□□□□□ -0.66
CPNE3-205ENST00000522240 ZNF561Q8N587 486 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 CD177Q8N6Q3 437 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 PPP1R35Q8TAP8 253 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 NEK7Q8TDX7 302 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 DEDD2Q8WXF8 326 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 CMSS1Q9BQ75 279 aaKnown RBP10.92□□□□□ -0.66
CPNE3-205ENST00000522240 THAP7Q9BT49 309 aaPredicted RBP10.92□□□□□ -0.66
CPNE3-205ENST00000522240 CHST6Q9GZX3 395 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 RIMS4Q9H426 269 aaPredicted RBP10.92□□□□□ -0.66
CPNE3-205ENST00000522240 BARX1Q9HBU1 254 aaPredicted RBP10.92□□□□□ -0.66
CPNE3-205ENST00000522240 ABCB10Q9NRK6 738 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 ZNF701Q9NV72 531 aaPredicted RBP10.92□□□□□ -0.66
CPNE3-205ENST00000522240 TAS2R8Q9NYW2 309 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 ELF5Q9UKW6 265 aaPredicted RBP10.92□□□□□ -0.66
CPNE3-205ENST00000522240 CELSR1Q9NYQ6 3014 aa10.92□□□□□ -0.66
CPNE3-205ENST00000522240 PDZD2O15018 2839 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 A0A1W2PQ09 198 aa10.91□□□□□ -0.66
CPNE3-205ENST00000522240 ISPDA4D126 451 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms