RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 TRAV14DV4A0A0A6YYC5 116 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 A0A1B0GW55 424 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 A0A1B0GWJ7 208 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 RPS10-NUDT3A0A1W2PQS6 291 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 LRP5LA4QPB2 252 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 CRYM-AS1A6NIL9 109 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 GEMIN2O14893 280 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 ARPC5O15511 151 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 NOS1APO75052 506 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 TOXO94900 526 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 NAPSAO96009 420 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 IGLV1-44P01699 117 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 WNT2P09544 360 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 DUX4L2P0CJ85 424 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 DUX4L3P0CJ86 424 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 DUX4L4P0CJ87 422 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 DUX4L5P0CJ88 424 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 DUX4L6P0CJ89 424 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 DUX4L7P0CJ90 424 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 OR5H8P0DN80 308 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 GLI4P10075 376 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 HOXC12P31275 282 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 MDH2P40926 338 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 HAAOP46952 286 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 RAB14P61106 215 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 RND3P61587 244 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 UBA52P62987 128 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 SUPT4H1P63272 117 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 SRPXP78539 464 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 EXOSC2Q13868 293 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 RBM39Q14498 530 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 HLXQ14774 488 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 DEFB109BQ30KR1 87 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 HIKESHIQ53FT3 197 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 KRTCAP3Q53RY4 240 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 CLEC18BQ6UXF7 455 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 ACOT7LQ6ZUV0 252 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 MOB1BQ7L9L4 216 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 SSX8Q7RTT4 187 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 RTN4RL2Q86UN3 420 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 SGPP2Q8IWX5 399 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 SLC38A6Q8IZM9 456 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 SLC7A5P1Q8MH63 180 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 CCDC71LQ8N9Z2 235 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 ADAD2Q8NCV1 583 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 THAP6Q8TBB0 222 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 SCARB1Q8WTV0 552 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 MOB3AQ96BX8 217 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 TRIB1Q96RU8 372 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 SYT3Q9BQG1 590 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 PDCD10Q9BUL8 212 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 SUCNR1Q9BXA5 334 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 BCL2L14Q9BZR8 327 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 MFFQ9GZY8 342 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 OR51I2Q9H344 312 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 C1orf123Q9NWV4 160 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 DNAJB11Q9UBS4 358 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 DUX4Q9UBX2 424 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 CSAG2Q9Y5P2 127 aa5.72□□□□□ -1.49
CTNNA1-228ENST00000521640 ZNF407Q9C0G0 2248 aa5.71□□□□□ -1.49
CTNNA1-228ENST00000521640 FXYD6-FXYD2A0A087WZ82 144 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 DUXBA0A1W2PPF3 345 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 ZNF732B4DXR9 585 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 NPIPB11E5RHQ5 1161 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 BCL2L11O43521 198 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 TSC22D2O75157 780 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 OR7C1O76099 320 aaPredicted RBP5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 SIX6O95475 246 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 NGFP01138 241 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 CGAP01215 116 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 IFNA2P01563 188 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 PGAM2P15259 253 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 AKR1C4P17516 323 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 KITLGP21583 273 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 CCNOP22674 350 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 PSMB6P28072 239 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 TIMP3P35625 211 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 RBMXP38159 391 aaKnown RBP5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 NPY4RP50391 375 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 LINC00310P59036 64 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 PPP1CBP62140 327 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 SORDQ00796 357 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 PMP22Q01453 160 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 NAAAQ02083 359 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 MZT1Q08AG7 82 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 SRSF6Q13247 344 aaKnown RBP5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 IL15RAQ13261 267 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 DAZAP2Q15038 168 aaPredicted RBP5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 PIGYQ3MUY2 71 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 SPIN3Q5JUX0 258 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 C9orf135Q5VTT2 229 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 ZNF880Q6PDB4 577 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 C17orf107Q6ZR85 190 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 KCTD9Q7L273 389 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 ZNF546Q86UE3 836 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 GAPTQ8N292 157 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 SPERTQ8NA61 448 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 STOML3Q8TAV4 291 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 LRRC20Q8TCA0 184 aa5.71□□□□□ -1.5
CTNNA1-228ENST00000521640 PPP1R1CQ8WVI7 109 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms