RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 HIDE1A8MVS5 230 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 NPIPA5E9PKD4 350 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 NPIPA3F8WFD2 350 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 KLRC4-KLRK1H3BQV0 150 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 HCRTO43612 131 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 CD5LO43866 347 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 VENTXO95231 258 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 LIPFP07098 398 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 STAG3L2P0CL84 134 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 IL9P15248 144 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 GNB3P16520 340 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 EN2P19622 333 aaPredicted RBP7.49□□□□□ -1.21
SHPRH-208ENST00000520752 CD22P20273 847 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 CTSSP25774 331 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 PSMB5P28074 263 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 TIMP3P35625 211 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 RBMXP38159 391 aaKnown RBP7.49□□□□□ -1.21
SHPRH-208ENST00000520752 CDKN2AP42771 156 aaKnown RBP7.49□□□□□ -1.21
SHPRH-208ENST00000520752 EFNB2P52799 333 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 CRYBA4P53673 196 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 RIPPLY3P57055 190 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 ARG2P78540 354 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 CCL7P80098 99 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 CDC42EP1Q00587 391 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 TLE3Q04726 772 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 MFGE8Q08431 387 aaPredicted RBP7.49□□□□□ -1.21
SHPRH-208ENST00000520752 Q0VG73 95 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 ZNF260Q3ZCT1 412 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 RTL6Q6ICC9 239 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 FAM180AQ6UWF9 173 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 Q6ZWC4 215 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 PARS2Q7L3T8 475 aaKnown RBP7.49□□□□□ -1.21
SHPRH-208ENST00000520752 ZNF627Q7L945 461 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 C16orf82Q7Z2V1 217 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 KRTAP19-1Q8IUB9 90 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 C17orf78Q8N4C9 275 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 ZNF709Q8N972 641 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 BHLHE23Q8NDY6 225 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 OR2G3Q8NGZ4 309 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 RAB8BQ92930 207 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 IL22RA2Q969J5 263 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 STARD4Q96DR4 205 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 ABHD14BQ96IU4 210 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 CAPNS2Q96L46 248 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 FER1L6-AS2Q96M78 137 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 RASL10BQ96S79 203 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 FAM110AQ9BQ89 295 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 WFDC6Q9BQY6 131 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 OR51I2Q9H344 312 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 ZDHHC6Q9H6R6 413 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 DMRT3Q9NQL9 472 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 SIRT3Q9NTG7 399 aaPredicted RBP7.49□□□□□ -1.21
SHPRH-208ENST00000520752 ABI3Q9P2A4 366 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 PEF1Q9UBV8 284 aaKnown RBP7.49□□□□□ -1.21
SHPRH-208ENST00000520752 AK3Q9UIJ7 227 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 NPIPA1Q9UND3 350 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 PXMP4Q9Y6I8 212 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 EP400Q96L91 3159 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 PLXNB2O15031 1838 aa7.49□□□□□ -1.21
SHPRH-208ENST00000520752 KIF26AQ9ULI4 1882 aaPredicted RBP7.49□□□□□ -1.21
SHPRH-208ENST00000520752 LCTP09848 1927 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 SAA2-SAA4A0A096LPE2 208 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 DUXBA0A1W2PPF3 345 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 CPSF4LA6NMK7 179 aaKnown RBP7.48□□□□□ -1.21
SHPRH-208ENST00000520752 NPIPB7O75200 414 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 PITX3O75364 302 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 ETHE1O95571 254 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 IGLC1P0CG04 106 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 PPIAL4GP0DN37 164 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 TUBG1P23258 451 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 AK4P27144 223 aaPredicted RBP7.48□□□□□ -1.21
SHPRH-208ENST00000520752 GPR6P46095 362 aaPredicted RBP7.48□□□□□ -1.21
SHPRH-208ENST00000520752 FOXL2P58012 376 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 CKS1BP61024 79 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 YPEL3P61236 119 aaPredicted RBP7.48□□□□□ -1.21
SHPRH-208ENST00000520752 RPL15P61313 204 aaKnown RBP7.48□□□□□ -1.21
SHPRH-208ENST00000520752 DCAF7P61962 342 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 SSBP2P81877 361 aaPredicted RBP7.48□□□□□ -1.21
SHPRH-208ENST00000520752 C17orf67Q0P5P2 114 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 MPV17LQ2QL34 196 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 IAH1Q2TAA2 248 aaPredicted RBP7.48□□□□□ -1.21
SHPRH-208ENST00000520752 C1orf100Q5SVJ3 147 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 PRAMEF5Q5TYX0 476 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 PRAMEF6Q5VXH4 476 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 MRPL54Q6P161 138 aaKnown RBP7.48□□□□□ -1.21
SHPRH-208ENST00000520752 ZNF880Q6PDB4 577 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 C12orf54Q6X4T0 127 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 TMEM182Q6ZP80 229 aaPredicted RBP7.48□□□□□ -1.21
SHPRH-208ENST00000520752 C19orf35Q6ZS72 473 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 NEGR1Q7Z3B1 354 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 S100A7AQ86SG5 101 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 TRAPPC6BQ86SZ2 158 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.48□□□□□ -1.21
SHPRH-208ENST00000520752 DEFB125Q8N687 156 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 NPEPL1Q8NDH3 523 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 OR2I1PQ8NGU4 316 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 OR4K13Q8NH42 304 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 VN1R17PQ8TDU5 208 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 FAM46BQ96A09 425 aa7.48□□□□□ -1.21
SHPRH-208ENST00000520752 TMEM230Q96A57 120 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms