RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 RNASEH2CQ8TDP1 164 aaKnown RBP3□□□□□ -1.93
HMGB1P46-201ENST00000520062 ITLN2Q8WWU7 325 aaPredicted RBP3□□□□□ -1.93
HMGB1P46-201ENST00000520062 PGLYRP3Q96LB9 341 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 ANAPC13Q9BS18 74 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 ZNF2Q9BSG1 426 aaPredicted RBP3□□□□□ -1.93
HMGB1P46-201ENST00000520062 FAAP24Q9BTP7 215 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 SCRT1Q9BWW7 348 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 DAZ1Q9NQZ3 744 aaKnown RBP3□□□□□ -1.93
HMGB1P46-201ENST00000520062 INIPQ9NRY2 104 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 TMEM38BQ9NVV0 291 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 COMMD9Q9P000 198 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 C14orf166Q9Y224 244 aaKnown RBP3□□□□□ -1.93
HMGB1P46-201ENST00000520062 SCN1AP35498 2009 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 PCM1Q15154 2024 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 SETD1AO15047 1707 aaKnown RBP2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 COL27A1Q8IZC6 1860 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 TRAV8-2A0A0B4J237 113 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 H3BP45 60 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 PHYHO14832 338 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 TCF21O43680 179 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 NRASP01111 189 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 HRASP01112 189 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 KRASP01116 189 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 SOD3P08294 240 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 TGFBR1P36897 503 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 LY6EQ16553 131 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 TIMM23BQ5SRD1 257 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 KPRPQ5T749 579 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 ZFAND6Q6FIF0 208 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 IGFL3Q6UXB1 125 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 C10orf107Q8IVU9 208 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 IQCF2Q8IXL9 164 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 ZFP62Q8NB50 900 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 OLFM3Q96PB7 478 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 TAPBPLQ9BX59 468 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 EURLQ9NYK6 297 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 TAS2R13Q9NYV9 303 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 ZNF706Q9Y5V0 76 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 PUS1Q9Y606 427 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 ANKRD12Q6UB98 2062 aa2.99□□□□□ -1.93
HMGB1P46-201ENST00000520062 RPRD2Q5VT52 1461 aaKnown RBP2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 IGHV2-26A0A0B4J1V2 119 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 C9J4A7 227 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 SMLR1H3BR10 107 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 TOX3O15405 576 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 CNMDO75829 334 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 KCNK2O95069 426 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 RAB36O95755 333 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 OCMP0CE72 109 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 PTHLHP12272 177 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 AKR1C4P17516 323 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 HLA-DMAP28067 261 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 STC1P52823 247 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 RAB8AP61006 207 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 KRTAP13-2Q52LG2 175 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 NIPAL1Q6NVV3 410 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 IGFL1Q6UW32 110 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 ZIC4Q8N9L1 334 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 ATP6V1C2Q8NEY4 427 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 OR2M3Q8NG83 312 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 DTD1Q8TEA8 209 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 TWIST2Q8WVJ9 160 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 RMI2Q96E14 147 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 FAM210AQ96ND0 272 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 UGT2B28Q9BY64 529 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 DHX35Q9H5Z1 703 aaKnown RBP2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 MARCOQ9UEW3 520 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 SCML1Q9UN30 329 aa2.98□□□□□ -1.93
HMGB1P46-201ENST00000520062 IGLL5B9A064 214 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 GOLGA8RI6L899 631 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 MPZL2O60487 215 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 CBR3O75828 277 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 SPNP16150 400 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 ATF1P18846 271 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 CELP19835 753 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 CNTFRP26992 372 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 PYCR1P32322 319 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 CBX5P45973 191 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 SKP1P63208 163 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 FAM131AQ6UXB0 335 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 BOD1L2Q8IYS8 172 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 LINC01587Q99440 93 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 HDHD2Q9H0R4 259 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 FBXL3Q9UKT7 428 aa2.97□□□□□ -1.93
HMGB1P46-201ENST00000520062 NUP153P49790 1475 aaKnown RBP2.96□□□□□ -1.93
HMGB1P46-201ENST00000520062 RAD50Q92878 1312 aa2.96□□□□□ -1.93
HMGB1P46-201ENST00000520062 IGHV3-43A0A0B4J1X8 118 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 TMEM250H0YL14 139 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 J3QLI3 93 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 ITGB1BP1O14713 200 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 AQP9O43315 295 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 FSTL3O95633 263 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 RD3LP0DJH9 198 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 RGS19P49795 217 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 GDI2P50395 445 aaKnown RBP2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 ZNF83P51522 516 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 RAB25P57735 213 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 FAM53BQ14153 422 aa2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 ENDOGQ14249 297 aaKnown RBP2.96□□□□□ -1.94
HMGB1P46-201ENST00000520062 ZNHIT3Q15649 155 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms