RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 DEGS1O15121 323 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 WDR1O75083 606 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 AGFG2O95081 481 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 ZNF205O95201 554 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 NAPSAO96009 420 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 PPYP01298 95 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 CRYABP02511 175 aaKnown RBP7.19□□□□□ -1.26
HMGB4-203ENST00000519684 GLAP06280 429 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 CTXN2P0C2S0 81 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 LUMP51884 338 aaPredicted RBP7.19□□□□□ -1.26
HMGB4-203ENST00000519684 ERVS71-1P61550 626 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 FOXF2Q12947 444 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 IAH1Q2TAA2 248 aaPredicted RBP7.19□□□□□ -1.26
HMGB4-203ENST00000519684 THOC7Q6I9Y2 204 aaKnown RBP7.19□□□□□ -1.26
HMGB4-203ENST00000519684 CXorf67Q86X51 503 aaPredicted RBP7.19□□□□□ -1.26
HMGB4-203ENST00000519684 PDZD9Q8IXQ8 264 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 FAM185AQ8N0U4 392 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 ZNF565Q8N9K5 539 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 GTF3AQ92664 365 aaKnown RBP7.19□□□□□ -1.26
HMGB4-203ENST00000519684 BOD1Q96IK1 185 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 HS3ST6Q96QI5 342 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 RSRP1Q9BUV0 290 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 OBP2BQ9NPH6 170 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 SLC2A9Q9NRM0 540 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 hCG_1807616A0A1W2PRN6 198 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 TMEM210A6NLX4 147 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 POM121CA8CG34 1229 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 MPTX1A8MV57 137 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 I3L521 148 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 HS3ST1O14792 307 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 BET1O15155 118 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 RLN2P04090 185 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 OR5AC1P0C628 307 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 ZNF44P15621 663 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 SPINK2P20155 84 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 TUBG1P23258 451 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 P2RY6Q15077 328 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 AANATQ16613 207 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 IGSF11Q5DX21 431 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 FIP1L1Q6UN15 594 aaKnown RBP7.19□□□□□ -1.26
HMGB4-203ENST00000519684 Q6ZS92 163 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 BHLHA15Q7RTS1 189 aaPredicted RBP7.19□□□□□ -1.26
HMGB4-203ENST00000519684 ZNF610Q8N9Z0 462 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 WDR31Q8NA23 367 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 PHYHIPLQ96FC7 376 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 GALNT14Q96FL9 552 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 LRFN3Q9BTN0 628 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 OPN3Q9H1Y3 402 aaPredicted RBP7.19□□□□□ -1.26
HMGB4-203ENST00000519684 SLC25A32Q9H2D1 315 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 TUBG2Q9NRH3 451 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 RASL12Q9NYN1 266 aa7.19□□□□□ -1.26
HMGB4-203ENST00000519684 MBD3L4A6NDZ8 208 aaPredicted RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 MBD3L3A6NE82 208 aaPredicted RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 MBD3L5A6NJ08 208 aaPredicted RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 H7C1Q1 480 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 RHBDL1O75783 438 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 IGKV3-15P01624 115 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 NMBP08949 121 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 LYL1P12980 280 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 MDH2P40926 338 aaKnown RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 SRPXP78539 464 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 RAB32Q13637 225 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 TMEM187Q14656 261 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 EIF2S3LQ2VIR3 472 aaKnown RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 TOR2AQ5JU69 321 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 GGNBP1Q5YKI7 109 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 Q6ZPA2 131 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 BEND4Q6ZU67 534 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 LGI3Q8N145 548 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 SCCPDHQ8NBX0 429 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 MBD3L2Q8NHZ7 208 aaPredicted RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 KLF14Q8TD94 323 aaPredicted RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 RDH5Q92781 318 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 RNF126Q9BV68 326 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 IFT22Q9H7X7 185 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 ZC4H2Q9NQZ6 224 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 TMEM100Q9NV29 134 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 MED9Q9NWA0 146 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 DNAJB11Q9UBS4 358 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 AMDHD2Q9Y303 409 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 ATP23Q9Y6H3 246 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 CACNA1HO95180 2353 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 PHF1O43189 567 aaPredicted RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 TNFSF13O75888 250 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 NXPH2O95156 264 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 GRPP07492 148 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 SCTP09683 121 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 TPT1P13693 172 aaKnown RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 PSG7Q13046 419 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 SP6Q3SY56 376 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 PAN3Q58A45 887 aaKnown RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 SPIN3Q5JUX0 258 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 C1orf185Q5T7R7 199 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 RGS7BPQ6MZT1 257 aaPredicted RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 LIAT1Q6ZQX7 453 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 FOXRED2Q8IWF2 684 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 ANGPTL6Q8NI99 470 aa7.18□□□□□ -1.26
HMGB4-203ENST00000519684 MRPL30Q8TCC3 161 aaKnown RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 RBPMSQ93062 196 aaKnown RBP7.18□□□□□ -1.26
HMGB4-203ENST00000519684 MRPL24Q96A35 216 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms