RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	SLC38A1	Q9H2H9	487 aa		0.39	□□□□□ -2.35
PCM1-208	ENST00000518877	TAS2R9	Q9NYW1	312 aa		0.39	□□□□□ -2.35
PCM1-208	ENST00000518877	RPUSD1	Q9UJJ7	312 aa	Known RBP	0.39	□□□□□ -2.35
PCM1-208	ENST00000518877	PHLDA3	Q9Y5J5	127 aa		0.39	□□□□□ -2.35
PCM1-208	ENST00000518877	MINOS1-NBL1	R4GNA1	71 aa		0.39	□□□□□ -2.35
PCM1-208	ENST00000518877	SBNO1	A3KN83	1393 aa		0.39	□□□□□ -2.35
PCM1-208	ENST00000518877	ADAMTSL3	P82987	1691 aa		0.39	□□□□□ -2.35
PCM1-208	ENST00000518877	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	0.39	□□□□□ -2.35
PCM1-208	ENST00000518877	ZNF638	Q14966	1978 aa	Known RBP	0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	IGHV1-45	A0A0A0MS14	117 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	IGKV1D-43	A0A0B4J1Z2	117 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877		A0A0J9YX75	114 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	RBFOX3	A6NFN3	312 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	AKR7A2	O43488	359 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	GPR75	O95800	540 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	ANG	P03950	147 aa	Known RBP	0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	FGF4	P08620	206 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	OR5AL1	P0C617	328 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	GZMB	P10144	247 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	LIPC	P11150	499 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	ZNF7	P17097	686 aa	Predicted RBP	0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	HTR2B	P41595	481 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	MAGEA3	P43357	314 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	TOMM34	Q15785	309 aa	Predicted RBP	0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	NDUFAF6	Q330K2	333 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	ACTBL2	Q562R1	376 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	SPIN4	Q56A73	249 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	LGALS9C	Q6DKI2	356 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	THOC7	Q6I9Y2	204 aa	Known RBP	0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	MRPL21	Q7Z2W9	205 aa	Known RBP	0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	OR2W3	Q7Z3T1	314 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	MICU2	Q8IYU8	434 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	DEFB119	Q8N690	84 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	OR4C16	Q8NGL9	310 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	OR6K3	Q8NGY3	331 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	RILP	Q96NA2	401 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	CHID1	Q9BWS9	393 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	MRPL32	Q9BYC8	188 aa	Known RBP	0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	ARMC7	Q9H6L4	198 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	EXO5	Q9H790	373 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	C12orf4	Q9NQ89	552 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	MRPL22	Q9NWU5	206 aa	Known RBP	0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	RRP15	Q9Y3B9	282 aa	Known RBP	0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	OR51B4	Q9Y5P0	310 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	CCDC88C	Q9P219	2028 aa		0.38	□□□□□ -2.35
PCM1-208	ENST00000518877	ROS1	P08922	2347 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	MUC21	A0A0G2JKD1	596 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	MUC21	A0A140T8X8	626 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	SLC5A10	A0PJK1	596 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	IGSF23	A1L1A6	192 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	CCDC169	A6NNP5	214 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877		H3BP45	60 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	EEF1E1	O43324	174 aa	Known RBP	0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	POP7	O75817	140 aa	Known RBP	0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	PLEKHA8P1	O95397	391 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	PRB4	P10163	310 aa	Predicted RBP	0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	CCT6A	P40227	531 aa	Known RBP	0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	SLC35B1	P78383	322 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	DYNC1I2	Q13409	638 aa	Known RBP	0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	CLEC12A	Q5QGZ9	265 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	ULK3	Q6PHR2	472 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	NELFCD	Q8IXH7	590 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	C2orf73	Q8N5S3	287 aa	Predicted RBP	0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	GPX8	Q8TED1	209 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	DCANP1	Q8TF63	244 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	GLYATL2	Q8WU03	294 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	TWIST2	Q8WVJ9	160 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	HIST1H2BA	Q96A08	127 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	CMBL	Q96DG6	245 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	CERS2	Q96G23	380 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	REEP6	Q96HR9	211 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	CPB2	Q96IY4	423 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	TSNAX	Q99598	290 aa	Known RBP	0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	ANAPC13	Q9BS18	74 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	MFSD1	Q9H3U5	465 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	WDR55	Q9H6Y2	383 aa	Predicted RBP	0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	C6orf50	Q9HD87	102 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	SDHAF3	Q9NRP4	125 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	ANXA10	Q9UJ72	324 aa		0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	NYNRIN	Q9P2P1	1898 aa	Known RBP	0.37	□□□□□ -2.35
PCM1-208	ENST00000518877	CEP170	Q5SW79	1584 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	MDN1	Q9NU22	5596 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	IGKV1-12	A0A0C4DH73	117 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	LOC100653049	A0A140TA62	436 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	VPS37C	A5D8V6	355 aa	Predicted RBP	0.36	□□□□□ -2.35
PCM1-208	ENST00000518877		K7EN84	100 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	KRT34	O76011	436 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	SOX14	O95416	240 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	IGKV1D-12	P01611	117 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	IGKV5-2	P06315	115 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	CECR9	P0C854	216 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	SCGB1C2	P0DMR2	95 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	PSKH1	P11801	424 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	ANXA8	P13928	327 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	PSMD4	P55036	377 aa	Known RBP	0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	PLTP	P55058	493 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	LRRC74A	Q0VAA2	488 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	APOF	Q13790	326 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	RAB11B	Q15907	218 aa		0.36	□□□□□ -2.35
PCM1-208	ENST00000518877	ATP6AP1L	Q52LC2	224 aa		0.36	□□□□□ -2.35

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms