RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 E7EQL1 145 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 hCG_2039718K7EN88 272 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 NDUFS8O00217 210 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 SPOPO43791 374 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 PSIP1O75475 530 aaKnown RBP1.99□□□□□ -2.09
SQLE-202ENST00000518604 SLC2A1P11166 492 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 GTF2F2P13984 249 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 TSPAN5P62079 268 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 BAXQ07812 192 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 DHRS2Q13268 280 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 TNXAQ16473 311 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 ACTBL2Q562R1 376 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 SSX6Q7RTT6 188 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 OR4K17Q8NGC6 315 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 LRRC20Q8TCA0 184 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 TWIST2Q8WVJ9 160 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 TRIB3Q96RU7 358 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 HIGD2AQ9BW72 106 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 GABARAPL1Q9H0R8 117 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 RAB1BQ9H0U4 201 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 NAGKQ9UJ70 344 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 TMEM131Q92545 1883 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 POLR3AO14802 1390 aaPredicted RBP1.98□□□□□ -2.09
SQLE-202ENST00000518604 PLXNB3Q9ULL4 1909 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 RAB19A4D1S5 217 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 J3QRE1 110 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 UBDO15205 165 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 CDS2O95674 445 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 PDYNP01213 254 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 GTF2H1P32780 548 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 RPA3P35244 121 aaPredicted RBP1.98□□□□□ -2.09
SQLE-202ENST00000518604 LGALS7P47929 136 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 HBMQ6B0K9 141 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 PHOSPHO2Q8TCD6 241 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 SLC25A44Q96H78 314 aaPredicted RBP1.98□□□□□ -2.09
SQLE-202ENST00000518604 SUCNR1Q9BXA5 334 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 SLC25A31Q9H0C2 315 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 POMKQ9H5K3 350 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 USH1CQ9Y6N9 552 aa1.98□□□□□ -2.09
SQLE-202ENST00000518604 TRAV8-3A0A0A6YYJ7 113 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 A0A0B4J2C4 111 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 A0A1B0GU33 70 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 MGAT4DA6NG13 374 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 ZNF878C9JN71 531 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 PSMD11O00231 422 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 PLPP3O14495 311 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 TCF21O43680 179 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 ENSAO43768 121 aaKnown RBP1.97□□□□□ -2.09
SQLE-202ENST00000518604 POP7O75817 140 aaKnown RBP1.97□□□□□ -2.09
SQLE-202ENST00000518604 S100A9P06702 114 aaKnown RBP1.97□□□□□ -2.09
SQLE-202ENST00000518604 PSMB9P28065 219 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 CRABP2P29373 138 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 FUSP35637 526 aaKnown RBP eCLIP1.97□□□□□ -2.09
SQLE-202ENST00000518604 XIAPP98170 497 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 CASP8Q14790 479 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 RBM45Q8IUH3 476 aaKnown RBP1.97□□□□□ -2.09
SQLE-202ENST00000518604 MUC7Q8TAX7 377 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 OR5P3Q8WZ94 311 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 LRRC39Q96DD0 335 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 APOL4Q9BPW4 351 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 HINT2Q9BX68 163 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 ULBP1Q9BZM6 244 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 ZNF436Q9C0F3 470 aaPredicted RBP1.97□□□□□ -2.09
SQLE-202ENST00000518604 GOLPH3Q9H4A6 298 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 TMBIM4Q9HC24 238 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 ATRNO75882 1429 aa1.97□□□□□ -2.09
SQLE-202ENST00000518604 IGHV1-45A0A0A0MS14 117 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 IGHV2-26A0A0B4J1V2 119 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 H3BMM0 161 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 M0QXV9 152 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 GPR75O95800 540 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 OPN1SWP03999 348 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 CGB3P0DN86 165 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 CGB7P0DN87 165 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 M6PRP20645 277 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 BCL2A1Q16548 175 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 ZCWPW2Q504Y3 356 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 PYCR3Q53H96 274 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 NXNL2Q5VZ03 156 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 LAMTOR1Q6IAA8 161 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 TRIML2Q8N7C3 387 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 Q8NAQ8 132 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 ZNF75CPQ92670 426 aaPredicted RBP1.96□□□□□ -2.1
SQLE-202ENST00000518604 UBE2WQ96B02 151 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 ZMYND19Q96E35 227 aaPredicted RBP1.96□□□□□ -2.1
SQLE-202ENST00000518604 CLEC2DQ9UHP7 191 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 RBMX2Q9Y388 322 aaKnown RBP1.96□□□□□ -2.1
SQLE-202ENST00000518604 PRR14LQ5THK1 2151 aa1.96□□□□□ -2.1
SQLE-202ENST00000518604 NLRC5Q86WI3 1866 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 I3L4J1 428 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 CRXO43186 299 aaPredicted RBP1.95□□□□□ -2.1
SQLE-202ENST00000518604 PDCD6O75340 191 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 CA2P00918 260 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 TNNC1P63316 161 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 HBG1P69891 147 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 HBG2P69892 147 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 MMDQ15546 238 aa1.95□□□□□ -2.1
SQLE-202ENST00000518604 TRIP13Q15645 432 aaPredicted RBP1.95□□□□□ -2.1
SQLE-202ENST00000518604 PSG3Q16557 428 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms