RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 RBM11P57052 281 aaKnown RBP18.04■□□□□ 0.48
VEGFA-217ENST00000518538 MEF2CQ06413 473 aaPredicted RBP18.04■□□□□ 0.48
VEGFA-217ENST00000518538 GLT8D1Q68CQ7 371 aa18.04■□□□□ 0.48
VEGFA-217ENST00000518538 TNFRSF14Q92956 283 aa18.04■□□□□ 0.48
VEGFA-217ENST00000518538 PPA2Q9H2U2 334 aa18.04■□□□□ 0.48
VEGFA-217ENST00000518538 ST3GAL6Q9Y274 331 aa18.04■□□□□ 0.48
VEGFA-217ENST00000518538 hADV38S2A0JD32 116 aa18.03■□□□□ 0.48
VEGFA-217ENST00000518538 CCL3L1P16619 93 aa18.03■□□□□ 0.48
VEGFA-217ENST00000518538 PSMB9P28065 219 aa18.03■□□□□ 0.48
VEGFA-217ENST00000518538 P2RX3P56373 397 aa18.03■□□□□ 0.48
VEGFA-217ENST00000518538 HILS1P60008 231 aa18.03■□□□□ 0.48
VEGFA-217ENST00000518538 GUCA2AQ02747 115 aa18.03■□□□□ 0.48
VEGFA-217ENST00000518538 RUSC1-AS1Q66K80 236 aa18.03■□□□□ 0.48
VEGFA-217ENST00000518538 NCR3LG1Q68D85 454 aa18.03■□□□□ 0.48
VEGFA-217ENST00000518538 LINC00596Q86U02 117 aa18.03■□□□□ 0.48
VEGFA-217ENST00000518538 C1orf147Q96MC9 270 aaPredicted RBP18.03■□□□□ 0.48
VEGFA-217ENST00000518538 JMJD8Q96S16 334 aa18.03■□□□□ 0.48
VEGFA-217ENST00000518538 hCG_1809904A0A1W2PP81 198 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 A0A1W2PPE2 198 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 A0A1W2PR64 198 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 A0A1W2PRV1 198 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 FUOMA2VDF0 154 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 CCRL2O00421 344 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 DLX1P56177 255 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 DLX6P56179 175 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 CD200R1LQ6Q8B3 271 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 TCF23Q7RTU1 214 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 C11orf42Q8N5U0 333 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 TPRX1Q8N7U7 411 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 SIGLECL1Q8N7X8 197 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 MRPS24Q96EL2 167 aaKnown RBP18.02■□□□□ 0.48
VEGFA-217ENST00000518538 IFT22Q9H7X7 185 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 GHRLQ9UBU3 117 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 SOX21Q9Y651 276 aaPredicted RBP18.02■□□□□ 0.48
VEGFA-217ENST00000518538 LINC00312Q9Y6C7 94 aa18.02■□□□□ 0.48
VEGFA-217ENST00000518538 TRAV24A0A0B4J272 114 aa18.01■□□□□ 0.47
VEGFA-217ENST00000518538 A0A1W2PP11 408 aa18.01■□□□□ 0.47
VEGFA-217ENST00000518538 C17orf98A8MV24 154 aa18.01■□□□□ 0.47
VEGFA-217ENST00000518538 RNASEK-C17orf49H0YIS7 233 aa18.01■□□□□ 0.47
VEGFA-217ENST00000518538 VENTXO95231 258 aa18.01■□□□□ 0.47
VEGFA-217ENST00000518538 ZNF728P0DKX0 622 aa18.01■□□□□ 0.47
VEGFA-217ENST00000518538 CD37P11049 281 aa18.01■□□□□ 0.47
VEGFA-217ENST00000518538 GALP22466 123 aa18.01■□□□□ 0.47
VEGFA-217ENST00000518538 CALRP27797 417 aaKnown RBP18.01■□□□□ 0.47
VEGFA-217ENST00000518538 SRSF2Q01130 221 aaKnown RBP18.01■□□□□ 0.47
VEGFA-217ENST00000518538 MPV17LQ2QL34 196 aa18.01■□□□□ 0.47
VEGFA-217ENST00000518538 C1orf100Q5SVJ3 147 aa18.01■□□□□ 0.47
VEGFA-217ENST00000518538 RBMS3Q6XE24 437 aaKnown RBP18.01■□□□□ 0.47
VEGFA-217ENST00000518538 PDZD9Q8IXQ8 264 aa18.01■□□□□ 0.47
VEGFA-217ENST00000518538 ZNF48Q96MX3 618 aaPredicted RBP18.01■□□□□ 0.47
VEGFA-217ENST00000518538 GEMIN2O14893 280 aaKnown RBP18■□□□□ 0.47
VEGFA-217ENST00000518538 OR7C1O76099 320 aaPredicted RBP18■□□□□ 0.47
VEGFA-217ENST00000518538 RBP4P02753 201 aa18■□□□□ 0.47
VEGFA-217ENST00000518538 PRB3Q04118 309 aaPredicted RBP18■□□□□ 0.47
VEGFA-217ENST00000518538 AESQ08117 197 aa18■□□□□ 0.47
VEGFA-217ENST00000518538 KLRD1Q13241 179 aa18■□□□□ 0.47
VEGFA-217ENST00000518538 PAN3Q58A45 887 aaKnown RBP18■□□□□ 0.47
VEGFA-217ENST00000518538 COQ2Q96H96 371 aa18■□□□□ 0.47
VEGFA-217ENST00000518538 ZNF714Q96N38 554 aa18■□□□□ 0.47
VEGFA-217ENST00000518538 TRDV1A0A1B0GX56 115 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 HSPB6O14558 160 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 TNFAIP8O95379 198 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 UBBP0CG47 229 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 GLIPR1P48060 266 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 KCNJ3P48549 501 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 UBE2E1P51965 193 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 ERVFRD-1P60508 538 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 ATXN7L3Q14CW9 347 aaPredicted RBP17.99■□□□□ 0.47
VEGFA-217ENST00000518538 KRBOX4Q5JUW0 171 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 TMEM158Q8WZ71 300 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 PRDM13Q9H4Q3 707 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 ZNF581Q9P0T4 197 aa17.99■□□□□ 0.47
VEGFA-217ENST00000518538 UBE2J1Q9Y385 318 aaPredicted RBP17.99■□□□□ 0.47
VEGFA-217ENST00000518538 TRGV10A0A0A0MS01 117 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 MEX3AA1L020 520 aaKnown RBP17.98■□□□□ 0.47
VEGFA-217ENST00000518538 SLC22A1O15245 554 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 MGMTP16455 207 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 PAX5Q02548 391 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 TAF9Q16594 264 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 DEFB112Q30KQ8 113 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 SYT6Q5T7P8 510 aaPredicted RBP17.98■□□□□ 0.47
VEGFA-217ENST00000518538 HCP5Q6MZN7 132 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 TRAPPC6BQ86SZ2 158 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 PIP4P2Q8N4L2 257 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 SUMF2Q8NBJ7 301 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 TMEM104Q8NE00 496 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 CORO2AQ92828 525 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 GFI1Q99684 422 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 DPCDQ9BVM2 203 aaPredicted RBP17.98■□□□□ 0.47
VEGFA-217ENST00000518538 CST11Q9H112 138 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 BANF2Q9H503 90 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 HEXA-AS1Q9H8Q6 139 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 ESM1Q9NQ30 184 aa17.98■□□□□ 0.47
VEGFA-217ENST00000518538 MDFIC2A0A1B0GVS7 189 aa17.97■□□□□ 0.47
VEGFA-217ENST00000518538 ODAMA1E959 279 aa17.97■□□□□ 0.47
VEGFA-217ENST00000518538 NPFFO15130 113 aa17.97■□□□□ 0.47
VEGFA-217ENST00000518538 CRTAPO75718 401 aaPredicted RBP17.97■□□□□ 0.47
VEGFA-217ENST00000518538 HTR2CP28335 458 aa17.97■□□□□ 0.47
VEGFA-217ENST00000518538 KRTAP24-1Q3LI83 254 aa17.97■□□□□ 0.47
VEGFA-217ENST00000518538 ZDHHC22Q8N966 263 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms