RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 CAPSLQ8WWF8 208 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 GIMAP1Q8WWP7 306 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 RORBQ92753 470 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 SGK3Q96BR1 496 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 CERS2Q96G23 380 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 PGLYRP4Q96LB8 373 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 PRAP1Q96NZ9 151 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 ATP5SQ99766 215 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 EBNA1BP2Q99848 306 aaKnown RBP2.28□□□□□ -2.04
CPNE3-204ENST00000517862 TMEM59Q9BXS4 323 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 BARHL1Q9BZE3 327 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 OR51M1Q9H341 326 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 EHD1Q9H4M9 534 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 RGCCQ9H4X1 137 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 GNB4Q9HAV0 340 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 FGF20Q9NP95 211 aaPredicted RBP2.28□□□□□ -2.04
CPNE3-204ENST00000517862 C20orf96Q9NUD7 363 aaPredicted RBP2.28□□□□□ -2.04
CPNE3-204ENST00000517862 TAC3Q9UHF0 121 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 RPL36Q9Y3U8 105 aaKnown RBP2.28□□□□□ -2.04
CPNE3-204ENST00000517862 ARL5AQ9Y689 179 aa2.28□□□□□ -2.04
CPNE3-204ENST00000517862 IGHV2OR16-5A0A0B4J2B6 119 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 A0A0G2JRQ6 117 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 CEACAM18A8MTB9 384 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 B4DXG7 233 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 K7N7A8 449 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 AIM2O14862 343 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 ERI3O43414 337 aaKnown RBP2.27□□□□□ -2.05
CPNE3-204ENST00000517862 AIREO43918 545 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 KBTBD11O94819 623 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 SCELO95171 688 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 PDYNP01213 254 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 FGGP02679 453 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 IGKV3-11P04433 115 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 SRMP19623 302 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 STOMP27105 288 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 CD1BP29016 333 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 AQP1P29972 269 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 RRM2P31350 389 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 IFNA8P32881 189 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 GPM6AP51674 278 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 RPL32P62910 135 aaKnown RBP2.27□□□□□ -2.05
CPNE3-204ENST00000517862 HMGCS1Q01581 520 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 PRDX1Q06830 199 aaKnown RBP2.27□□□□□ -2.05
CPNE3-204ENST00000517862 PNOCQ13519 176 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 EBPQ15125 230 aaKnown RBP2.27□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF239Q16600 458 aaKnown RBP2.27□□□□□ -2.05
CPNE3-204ENST00000517862 DGUOKQ16854 277 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 PLPPR5Q32ZL2 321 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 PTPN20Q4JDL3 420 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 SAMD4BQ5PRF9 694 aaKnown RBP2.27□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF658Q5TYW1 1059 aaPredicted RBP2.27□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF343Q6P1L6 599 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF613Q6PF04 617 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 Q6ZN92 141 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 MBOAT1Q6ZNC8 495 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF497Q6ZNH5 498 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 TMUB2Q71RG4 321 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 VTCN1Q7Z7D3 282 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 SKA3Q8IX90 412 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 CA13Q8N1Q1 262 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 OR4C5Q8NGB2 326 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 GLYATL2Q8WU03 294 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 CHCHD10Q8WYQ3 142 aaPredicted RBP2.27□□□□□ -2.05
CPNE3-204ENST00000517862 RAD51AP1Q96B01 352 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 OR8B4Q96RC9 309 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 GPR21Q99679 349 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 VGLL1Q99990 258 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 TMEM246Q9BRR3 403 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 MFFQ9GZY8 342 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 HAUS4Q9H6D7 363 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 NIPAL2Q9H841 368 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 DMAC2Q9NW81 257 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 LYARQ9NX58 379 aaKnown RBP2.27□□□□□ -2.05
CPNE3-204ENST00000517862 CFAP45Q9UL16 551 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 TRAF3IP3Q9Y228 551 aa2.27□□□□□ -2.05
CPNE3-204ENST00000517862 A0A0J9YW62 118 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 PRSS37A4D1T9 235 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 A6NIZ1 184 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 DHRS7CA6NNS2 312 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 GPR171O14626 319 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 NDUFB2O95178 105 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 IFNA21P01568 189 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 IFNA17P01571 189 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 MBP02144 154 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 H2AFZP0C0S5 128 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 UBCP0CG48 685 aaKnown RBP2.26□□□□□ -2.05
CPNE3-204ENST00000517862 GATA1P15976 413 aaPredicted RBP2.26□□□□□ -2.05
CPNE3-204ENST00000517862 HMOX2P30519 316 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 OTX1P32242 354 aaPredicted RBP2.26□□□□□ -2.05
CPNE3-204ENST00000517862 BMI1P35226 326 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 COILP38432 576 aaPredicted RBP2.26□□□□□ -2.05
CPNE3-204ENST00000517862 RAB8AP61006 207 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 UBE2MP61081 183 aaKnown RBP2.26□□□□□ -2.05
CPNE3-204ENST00000517862 RAP1BP61224 184 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 CXCL6P80162 114 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 MRPS22P82650 360 aaKnown RBP2.26□□□□□ -2.05
CPNE3-204ENST00000517862 MS4A2Q01362 244 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 TGFBR3Q03167 851 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 ACVR1Q04771 509 aa2.26□□□□□ -2.05
CPNE3-204ENST00000517862 MAB21L1Q13394 359 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms