RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 C8orf31Q8N9H6 132 aa0.26□□□□□ -2.37
RNU6-1088P-201ENST00000516850 INO80EQ8NBZ0 244 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ERMNQ8TAM6 284 aa0.26□□□□□ -2.37
RNU6-1088P-201ENST00000516850 NT5CQ8TCD5 201 aa0.26□□□□□ -2.37
RNU6-1088P-201ENST00000516850 MRPS24Q96EL2 167 aaKnown RBP0.26□□□□□ -2.37
RNU6-1088P-201ENST00000516850 QKIQ96PU8 341 aaKnown RBP eCLIP0.26□□□□□ -2.37
RNU6-1088P-201ENST00000516850 NDUFB11Q9NX14 153 aa0.26□□□□□ -2.37
RNU6-1088P-201ENST00000516850 LINC00588Q9Y4M8 146 aa0.26□□□□□ -2.37
RNU6-1088P-201ENST00000516850 PHLDA3Q9Y5J5 127 aa0.26□□□□□ -2.37
RNU6-1088P-201ENST00000516850 KDM5BQ9UGL1 1544 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 USP42Q9H9J4 1324 aaKnown RBP0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 IGKV3D-7A0A0C4DH55 119 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 IGKV3OR2-268A0A0C4DH90 116 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 OR2AT4A6NND4 320 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 A8MWP6 167 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 PHGR1C9JFL3 82 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TEX46H3BTG2 121 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TRDMT1O14717 391 aaKnown RBP0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 RLN2P04090 185 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 GSTM3P21266 225 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 PRTN3P24158 256 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 HINT1P49773 126 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TOMM34Q15785 309 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TPRG1LQ5T0D9 272 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ERICH5Q6P6B1 374 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TMEM220Q6QAJ8 160 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 OR11G2Q8NGC1 345 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 CPB2Q96IY4 423 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 GLT1D1Q96MS3 346 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 Q9BRP9 147 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ZNF436Q9C0F3 470 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 NAA50Q9GZZ1 169 aaKnown RBP0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 CLSTN2Q9H4D0 955 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TFR2Q9UP52 801 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 FLVCR2Q9UPI3 526 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 CFL2Q9Y281 166 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 MINOS1-NBL1R4GNA1 71 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 KMT2DO14686 5537 aa0.25□□□□□ -2.37
RNU6-1088P-201ENST00000516850 LAMB4A4D0S4 1761 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 COL18A1P39060 1754 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 IGHV1-45A0A0A0MS14 117 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 IGKV1-9A0A0C4DH69 117 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 J3QQQ9 107 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ZNF701M0R085 212 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 RWDD2BP57060 319 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 OR2B6P58173 313 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 RPL26P61254 145 aaKnown RBP0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 WDR43Q15061 677 aaKnown RBP eCLIP0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ZBTB6Q15916 424 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 LAIR2Q6ISS4 152 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TMEM53Q6P2H8 277 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 GALNT10Q86SR1 603 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 PQLC3Q8N755 202 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 OR4X2Q8NGF9 303 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ZNRF2Q8NHG8 242 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ELOVL6Q9H5J4 265 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TMCC3Q9ULS5 477 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 RPL26L1Q9UNX3 145 aaKnown RBP0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 SLC22A14Q9Y267 594 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 BTRCQ9Y297 605 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 KLF12Q9Y4X4 402 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 HEY1Q9Y5J3 304 aa0.24□□□□□ -2.37
RNU6-1088P-201ENST00000516850 POLR3AO14802 1390 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 CLUHO75153 1309 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 IGKV3-7A0A075B6H7 116 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 IGKV2D-26A0A0A0MRZ7 120 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 FAM240AA0A1B0GVK7 77 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 IGSF23A1L1A6 192 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 SOX14O95416 240 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ALOX5APP20292 161 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ZNF117Q03924 483 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 PLCXD2Q0VAA5 305 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 HTR4Q13639 388 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 APOFQ13790 326 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 MMDQ15546 238 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 UAP1Q16222 522 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 SYT6Q5T7P8 510 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 GLYATQ6IB77 296 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TSEN15Q8WW01 171 aaKnown RBP0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ISOC2Q96AB3 205 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 OLFM3Q96PB7 478 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 TSSK6Q9BXA6 273 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 VPS37BQ9H9H4 285 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 ANGPT4Q9Y264 503 aa0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 MRPS16Q9Y3D3 137 aaKnown RBP0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 PUS1Q9Y606 427 aaKnown RBP eCLIP0.23□□□□□ -2.37
RNU6-1088P-201ENST00000516850 SLX4Q8IY92 1834 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 SBNO1A3KN83 1393 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 INSRP06213 1382 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 WDR19Q8NEZ3 1342 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 VPS37CA5D8V6 355 aaPredicted RBP0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 RNASEK-C17orf49H0YIS7 233 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 H7C2Y5 167 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 MPHOSPH10O00566 681 aaKnown RBP0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 OR5AL1P0C617 328 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 CECR9P0C854 216 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 CD9P21926 228 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 PEBP1P30086 187 aaKnown RBP0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 SPAM1P38567 509 aa0.22□□□□□ -2.37
RNU6-1088P-201ENST00000516850 HCCSP53701 268 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms