RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 RHOXF2Q9BQY4 288 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 LXNQ9BS40 222 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 CALN1Q9BXU9 219 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 TOLLIPQ9H0E2 274 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 PLEKHF2Q9H8W4 249 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 SLC39A1Q9NY26 324 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 BTRCQ9Y297 605 aa1.71□□□□□ -2.14
LINC01088-211ENST00000515597 HERC1Q15751 4861 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 SMIM26A0A096LP01 95 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 IGHV3OR16-9A0A0B4J2B5 98 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 GOLGA6L7A0A1B0GV03 622 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 FAM92AA1XBS5 289 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 VGLL3A8MV65 326 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 F8VP50 259 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 PRAMEF26H0Y7S4 382 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 H7C1H1 209 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 THRAP10827 490 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 CR1P17927 2039 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 CSNK2A2P19784 350 aaPredicted RBP1.7□□□□□ -2.14
LINC01088-211ENST00000515597 MYL9P24844 172 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 CALRP27797 417 aaKnown RBP1.7□□□□□ -2.14
LINC01088-211ENST00000515597 GTF2E2P29084 291 aaKnown RBP1.7□□□□□ -2.14
LINC01088-211ENST00000515597 MPV17P39210 176 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 PSMD8P48556 350 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 CRISP1P54107 249 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 RBX1P62877 108 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 LIPEQ05469 1076 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 PRKCDQ05655 676 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 MAD2L1BPQ15013 274 aaPredicted RBP1.7□□□□□ -2.14
LINC01088-211ENST00000515597 HNRNPA1L2Q32P51 320 aaKnown RBP1.7□□□□□ -2.14
LINC01088-211ENST00000515597 SPIN3Q5JUX0 258 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 PRAMEF20Q5VT98 475 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 SPESP1Q6UW49 350 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 RTL4Q6ZR62 310 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 SCD5Q86SK9 330 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 RPRMLQ8N4K4 120 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 GPR26Q8NDV2 337 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 C19orf18Q8NEA5 215 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 OR9G4Q8NGQ1 327 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 FAM81AQ8TBF8 368 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 C2orf15Q8WU43 125 aaKnown RBP1.7□□□□□ -2.14
LINC01088-211ENST00000515597 CT55Q8WUE5 264 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 PATE1Q8WXA2 126 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 OTUB2Q96DC9 234 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 WDR34Q96EX3 536 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 RNF145Q96MT1 663 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 COL21A1Q96P44 957 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 ZNF317Q96PQ6 595 aaPredicted RBP1.7□□□□□ -2.14
LINC01088-211ENST00000515597 GSDMAQ96QA5 445 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 XPO6Q96QU8 1125 aaKnown RBP1.7□□□□□ -2.14
LINC01088-211ENST00000515597 TMEM243Q9BU79 118 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 DDA1Q9BW61 102 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 TRPM6Q9BX84 2022 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 SAMD10Q9BYL1 202 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 ZYG11BQ9C0D3 744 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 SLIRPQ9GZT3 109 aaKnown RBP1.7□□□□□ -2.14
LINC01088-211ENST00000515597 MRM3Q9HC36 420 aaKnown RBP1.7□□□□□ -2.14
LINC01088-211ENST00000515597 NEK6Q9HC98 313 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 ZNF160Q9HCG1 818 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 CSNK1G1Q9HCP0 422 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 RETNQ9HD89 108 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 SLC17A7Q9P2U7 560 aa1.7□□□□□ -2.14
LINC01088-211ENST00000515597 NYNRINQ9P2P1 1898 aaKnown RBP1.69□□□□□ -2.14
LINC01088-211ENST00000515597 DNAH9Q9NYC9 4486 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 OR6C70A6NIJ9 312 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 EIF3HO15372 352 aaKnown RBP eCLIP1.69□□□□□ -2.14
LINC01088-211ENST00000515597 LYPLA2O95372 231 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 AGTP01019 485 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 HBE1P02100 147 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 MT-ND4P03905 459 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 RAB4AP20338 218 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 PCK1P35558 622 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 SYKP43405 635 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 IDH2P48735 452 aaKnown RBP1.69□□□□□ -2.14
LINC01088-211ENST00000515597 RAB7AP51149 207 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 IFITM3Q01628 133 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 SLC25A35Q3KQZ1 300 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 PRSS54Q6PEW0 395 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 XKRXQ6PP77 449 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 CBLN2Q8IUK8 224 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 CDH26Q8IXH8 852 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 DNAAF3Q8N9W5 541 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 OR52K2Q8NGK3 314 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 NAT6Q93015 286 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 RERGQ96A58 199 aaPredicted RBP1.69□□□□□ -2.14
LINC01088-211ENST00000515597 TVP23CQ96ET8 276 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 ACBD6Q9BR61 282 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 CCDC77Q9BR77 488 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 ACTR3CQ9C0K3 210 aaPredicted RBP1.69□□□□□ -2.14
LINC01088-211ENST00000515597 TMEM38AQ9H6F2 299 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 LYARQ9NX58 379 aaKnown RBP1.69□□□□□ -2.14
LINC01088-211ENST00000515597 ZNF586Q9NXT0 402 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 ZNF391Q9UJN7 358 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 ZNF229Q9UJW7 825 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 ANKRD12Q6UB98 2062 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 CCDC88CQ9P219 2028 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 NUP210LQ5VU65 1888 aa1.69□□□□□ -2.14
LINC01088-211ENST00000515597 INTS1Q8N201 2190 aaKnown RBP1.68□□□□□ -2.14
LINC01088-211ENST00000515597 DOCK10Q96BY6 2186 aa1.68□□□□□ -2.14
LINC01088-211ENST00000515597 CEACAM18A8MTB9 384 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms