RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 HIVEP2P31629 2446 aa4.71□□□□□ -1.66
NUP54-218ENST00000515460 UNC13CQ8NB66 2214 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 TRAV8-7A0A075B6U6 113 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 TRAV26-1A0A087WT03 109 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 LOC105369274A0A096LPK9 316 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 C7orf77A4D0Y5 90 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 NKX2-6A6NCS4 301 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 TLCD2A6NGC4 264 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 IDSB3KWA1 339 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 ZNF814B7Z6K7 855 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 F5H5P2 479 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 H3BMH7 237 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 M0R036 132 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 SULT2B1O00204 365 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 CORTO00230 105 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 MANBAO00462 879 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 SLC16A5O15375 505 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 ZNF208O43345 1280 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 HCRTR1O43613 425 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 REM1O75628 298 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 KLF7O75840 302 aaPredicted RBP4.7□□□□□ -1.66
NUP54-218ENST00000515460 TOXO94900 526 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 SCELO95171 688 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 FARS2O95363 451 aaKnown RBP4.7□□□□□ -1.66
NUP54-218ENST00000515460 METTL18O95568 372 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 LY6G6DO95868 133 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 PTHP01270 115 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 CD14P08571 375 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 SFTA3P0C7M3 94 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 OR5H8P0DN80 308 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 BCKDHAP12694 445 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 TNFSF4P23510 183 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 S100GP29377 79 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 PRDX3P30048 256 aaKnown RBP4.7□□□□□ -1.66
NUP54-218ENST00000515460 OTX2P32243 289 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 CDKN2AP42771 156 aaKnown RBP4.7□□□□□ -1.66
NUP54-218ENST00000515460 RPL29P47914 159 aaKnown RBP4.7□□□□□ -1.66
NUP54-218ENST00000515460 RFX3P48380 749 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 FOXL2P58012 376 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 H3F3AP84243 136 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 CDK5Q00535 292 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 PAX2Q02962 417 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 PRDX4Q13162 271 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 C18orf21Q32NC0 220 aaPredicted RBP4.7□□□□□ -1.66
NUP54-218ENST00000515460 TMEM268Q5VZI3 342 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 OR4A47Q6IF82 309 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 ZNF613Q6PF04 617 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 TMPPEQ6ZT21 453 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 DET1Q7L5Y6 550 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 ADCK2Q7Z695 626 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 SLC35E3Q7Z769 313 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 OOSP2Q86WS3 158 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 OR4N4Q8N0Y3 316 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 BATF2Q8N1L9 274 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 GTPBP8Q8N3Z3 284 aaPredicted RBP4.7□□□□□ -1.66
NUP54-218ENST00000515460 OR4D6Q8NGJ1 314 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 HMGCLL1Q8TB92 370 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 EEF1AKMT1Q8WVE0 214 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 MCHR2Q969V1 340 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 TMEM186Q96B77 213 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 MOB3AQ96BX8 217 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 RAB39BQ96DA2 213 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 RBMXL1Q96E39 390 aaKnown RBP4.7□□□□□ -1.66
NUP54-218ENST00000515460 C16orf58Q96GQ5 468 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 THOC3Q96J01 351 aaKnown RBP4.7□□□□□ -1.66
NUP54-218ENST00000515460 ITCHQ96J02 903 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 LINC00615Q96LM1 132 aaPredicted RBP4.7□□□□□ -1.66
NUP54-218ENST00000515460 FER1L6-AS2Q96M78 137 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 YPEL4Q96NS1 127 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 OR5B12Q96R08 314 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 SEPHS2Q99611 448 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 ABHD14AQ9BUJ0 271 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 SELENOIQ9C0D9 397 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 LAT2Q9GZY6 243 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 RNF167Q9H6Y7 350 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 GPR83Q9NYM4 423 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 TAS2R5Q9NYW4 299 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 CCDC167Q9P0B6 97 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 MRPL27Q9P0M9 148 aaKnown RBP4.7□□□□□ -1.66
NUP54-218ENST00000515460 B3GAT1Q9P2W7 334 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 RAB22AQ9UL26 194 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 PROCRQ9UNN8 238 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 NTNG1Q9Y2I2 539 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 URGCP-MRPS24S4R325 110 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 HERC2O95714 4834 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 ANKRD36A6QL64 1941 aa4.7□□□□□ -1.66
NUP54-218ENST00000515460 CNTRLQ7Z7A1 2325 aa4.69□□□□□ -1.66
NUP54-218ENST00000515460 hCG_1818297A0A087WSY0 165 aa4.69□□□□□ -1.66
NUP54-218ENST00000515460 A0A087WWC5 75 aa4.69□□□□□ -1.66
NUP54-218ENST00000515460 FXYD6-FXYD2A0A087WZ82 144 aa4.69□□□□□ -1.66
NUP54-218ENST00000515460 IGHV2OR16-5A0A0B4J2B6 119 aa4.69□□□□□ -1.66
NUP54-218ENST00000515460 TMEM272A0A1B0GTI8 110 aa4.69□□□□□ -1.66
NUP54-218ENST00000515460 FBLL1A6NHQ2 334 aaKnown RBP4.69□□□□□ -1.66
NUP54-218ENST00000515460 TMEM150CB9EJG8 249 aa4.69□□□□□ -1.66
NUP54-218ENST00000515460 F8WDY8 70 aa4.69□□□□□ -1.66
NUP54-218ENST00000515460 RNASEK-C17orf49H0YIS7 233 aa4.69□□□□□ -1.66
NUP54-218ENST00000515460 J3KTA2 159 aa4.69□□□□□ -1.66
NUP54-218ENST00000515460 GSTZ1O43708 216 aaPredicted RBP4.69□□□□□ -1.66
NUP54-218ENST00000515460 OR7C2O60412 319 aa4.69□□□□□ -1.66
NUP54-218ENST00000515460 TPST2O60704 377 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms