RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 RSU1Q15404 277 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 SSX2Q16385 188 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 MIDNQ504T8 468 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 SPIN3Q5JUX0 258 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 C6orf141Q5SZD1 244 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 DDI2Q5TDH0 399 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 BRICD5Q6PL45 260 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 Q6ZSV7 163 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 SAXO1Q8IYX7 474 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 BEND2Q8NDZ0 799 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 OR4F5Q8NH21 305 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 LINC01006Q8NI28 216 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 COQ2Q96H96 371 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 CYYR1Q96J86 154 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 PGLYRP3Q96LB9 341 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 OR14A2Q96R54 314 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 PPIL3Q9H2H8 161 aaKnown RBP9.32□□□□□ -0.92
VCAN-212ENST00000515397 VCXQ9H320 206 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 BEX1Q9HBH7 125 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 PLCXD1Q9NUJ7 323 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 VPREB3Q9UKI3 123 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 HILPDAQ9Y5L2 63 aa9.32□□□□□ -0.92
VCAN-212ENST00000515397 TRAV24A0A0B4J272 114 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 CLPSL1A2RUU4 121 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 MYL12BO14950 172 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 PIN1P1O15428 100 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 IGHV3-7P01780 117 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 MAS1P04201 325 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 LMO1P25800 156 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 BDKRB2P30411 391 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 ZNF93P35789 620 aaPredicted RBP9.31□□□□□ -0.92
VCAN-212ENST00000515397 TGFBR2P37173 567 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 PPP3R1P63098 170 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 GABPB1Q06547 395 aaPredicted RBP9.31□□□□□ -0.92
VCAN-212ENST00000515397 FAM189A2Q15884 450 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 Q499Y3 187 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 PAN3Q58A45 887 aaKnown RBP9.31□□□□□ -0.92
VCAN-212ENST00000515397 KRBOX4Q5JUW0 171 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 OLFML2AQ68BL7 652 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 DHRS7BQ6IAN0 325 aaPredicted RBP9.31□□□□□ -0.92
VCAN-212ENST00000515397 SLC35E4Q6ICL7 350 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 SHISA2Q6UWI4 295 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 NANOGP1Q8N7R0 232 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 OR13D1Q8NGV5 346 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 PIFOQ8TCI5 191 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 HAVCR2Q8TDQ0 301 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 OR5M11Q96RB7 305 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 ZNF184Q99676 751 aaPredicted RBP9.31□□□□□ -0.92
VCAN-212ENST00000515397 MEGF9Q9H1U4 602 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 SEBOXQ9HB31 216 aaPredicted RBP9.31□□□□□ -0.92
VCAN-212ENST00000515397 TMEM138Q9NPI0 162 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 FKBP14Q9NWM8 211 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 PAK1IP1Q9NWT1 392 aaPredicted RBP9.31□□□□□ -0.92
VCAN-212ENST00000515397 CNOT2Q9NZN8 540 aaKnown RBP9.31□□□□□ -0.92
VCAN-212ENST00000515397 RNF114Q9Y508 228 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 PCDHGB5Q9Y5G0 923 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 LINC00312Q9Y6C7 94 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 WNK1Q9H4A3 2382 aa9.31□□□□□ -0.92
VCAN-212ENST00000515397 TRBV5-7A0A0A0MS05 114 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 ODAMA1E959 279 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 FAM90A8PA6NJQ4 464 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 POM121CA8CG34 1229 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 ODF3BA8MYP8 253 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 NDUFA7O95182 113 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 CDK1P06493 297 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 IGFBP3P17936 291 aaPredicted RBP9.3□□□□□ -0.92
VCAN-212ENST00000515397 SERPINA2P20848 420 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 CDK2P24941 298 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 CD24P25063 80 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 ERP29P30040 261 aaKnown RBP9.3□□□□□ -0.92
VCAN-212ENST00000515397 MTNR1BP49286 362 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 WNT4P56705 351 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 RIPK1Q13546 671 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 LTC4SQ16873 150 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 LRRC75BQ2VPJ9 315 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 SLC22A6Q4U2R8 563 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 FAM27D1Q5T7N8 215 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 CCBE1Q6UXH8 406 aaPredicted RBP9.3□□□□□ -0.92
VCAN-212ENST00000515397 GDPGP1Q6ZNW5 385 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 TMEM219Q86XT9 240 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 PXT1Q8NFP0 134 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 RFESDQ8TAC1 157 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 PLPPR1Q8TBJ4 325 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 LEAP2Q969E1 77 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 MUL1Q969V5 352 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 KIF25Q9UIL4 384 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 ST3GAL6Q9Y274 331 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 ERGIC3Q9Y282 383 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 SESN1Q9Y6P5 492 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 DSCAML1Q8TD84 2053 aa9.3□□□□□ -0.92
VCAN-212ENST00000515397 MEIKINA0A087WXM9 373 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 TRGV10A0A0A0MS01 117 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 IGHV2-26A0A0B4J1V2 119 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 MEGF11A6BM72 1044 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 GEMIN2O14893 280 aaKnown RBP9.29□□□□□ -0.92
VCAN-212ENST00000515397 CHST1O43916 411 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 ALDOBP05062 364 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 VHLP40337 213 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 YIF1BQ5BJH7 314 aa9.29□□□□□ -0.92
VCAN-212ENST00000515397 ZNF626Q68DY1 528 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms