RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 BAIAP2L2Q6UXY1 529 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 HEPN1Q6WQI6 88 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 Q6ZTK2 550 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 TMEM219Q86XT9 240 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 DTX3Q8N9I9 347 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 ZNF555Q8NEP9 628 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 PXT1Q8NFP0 134 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 CPNE2Q96FN4 548 aaPredicted RBP8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 COQ2Q96H96 371 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 SERTAD4Q9NUC0 356 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 PRKDCP78527 4128 aaKnown RBP8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 ODAMA1E959 279 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 FAM90A22PA8MWA6 464 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 BAG2O95816 211 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 IGLV1-47P01700 117 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 CSF1P09603 554 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 TMEM225BP0DP42 221 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 RAB3AP20336 220 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 CDK2P24941 298 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 DCKP27707 260 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 CD34P28906 385 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 GDNFP39905 211 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 PTGFRP43088 359 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 SOX2P48431 317 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 ETV1P50549 477 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 BDH1Q02338 343 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 SLC34A1Q06495 639 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 HABP2Q14520 560 aaPredicted RBP8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 ATXN7L3Q14CW9 347 aaPredicted RBP8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 OR52W1Q6IF63 320 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 RPL22L1Q6P5R6 122 aaKnown RBP8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 RTN4RL2Q86UN3 420 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 ABHD12Q8N2K0 398 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 Q8NFD4 153 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 OR51A2Q8NGJ7 313 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 OR51T1Q8NGJ9 327 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 NDNFQ8TB73 568 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 CNIH3Q8TBE1 160 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 GPR148Q8TDV2 347 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 WIPF2Q8TF74 440 aaPredicted RBP8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 STMN2Q93045 179 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 SMIM19Q96E16 107 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 NKX3-1Q99801 234 aaPredicted RBP8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 PPIL3Q9H2H8 161 aaKnown RBP8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 TAS2R4Q9NYW5 299 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 DIMT1Q9UNQ2 313 aaKnown RBP8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 HILPDAQ9Y5L2 63 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 DSCAML1Q8TD84 2053 aa8.41□□□□□ -1.06
HMGXB3-205ENST00000514469 A0A087X0M5 115 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 A0A1B0GX30 115 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 IRGMA1A4Y4 181 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 ZNF729A6NN14 1252 aaPredicted RBP8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 H0YJX3 145 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 DEGS1O15121 323 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 CLIC3O95833 236 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 CD2P06729 351 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 VSIG10L2P0DP72 767 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 HTR1DP28221 377 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 PAX5Q02548 391 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 SCN1BQ07699 218 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 IL13RA2Q14627 380 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 C17orf58Q2M2W7 97 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 KRBOX4Q5JUW0 171 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 OR2G6Q5TZ20 316 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 TMPRSS11AQ6ZMR5 421 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 PACRGLQ8N7B6 248 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 FAM110DQ8TAY7 271 aaPredicted RBP8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 ZNF596Q8TC21 504 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 TNFAIP8L1Q8WVP5 186 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 TMEM106AQ96A25 262 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 ZNF286AQ9HBT8 521 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 C8orf4Q9NR00 106 aa8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 EXOSC1Q9Y3B2 195 aaKnown RBP8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 SIRT4Q9Y6E7 314 aaPredicted RBP8.4□□□□□ -1.06
HMGXB3-205ENST00000514469 TRAV24A0A0B4J272 114 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM172BPA6NC97 362 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 MAGEB3O15480 346 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 OGG1O15527 345 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 LALBAP00709 142 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 ALDOBP05062 364 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 CGB3P0DN86 165 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 CGB7P0DN87 165 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 OR3A4PP47883 348 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 ADARB1P78563 741 aaKnown RBP8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 HLA-DRB5Q30154 266 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 PIGYQ3MUY2 71 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 PAN3Q58A45 887 aaKnown RBP8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 NHLRC3Q5JS37 347 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 TTC23Q5W5X9 447 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 HIST2H2BDQ6DRA6 164 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 ASCL4Q6XD76 172 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 C16orf82Q7Z2V1 217 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 C11orf44Q8N8P7 122 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 SETD9Q8NE22 299 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 OR4D6Q8NGJ1 314 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 OR10K1Q8NGX5 313 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 OR52N1Q8NH53 320 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 CYGBQ8WWM9 190 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 GPER1Q99527 375 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 PRSS22Q9GZN4 317 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms