RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ZDHHC23Q8IYP9 409 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 MUC20Q8N307 709 aaPredicted RBP6.97□□□□□ -1.29
CCL28-204ENST00000514421 TMEM229BQ8NBD8 167 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 OR10Z1Q8NGY1 313 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 DVL3Q92997 716 aaPredicted RBP6.97□□□□□ -1.29
CCL28-204ENST00000514421 FAM46BQ96A09 425 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 PHF21AQ96BD5 680 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 RAB39BQ96DA2 213 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 CPNE2Q96FN4 548 aaPredicted RBP6.97□□□□□ -1.29
CCL28-204ENST00000514421 TM2D1Q9BX74 207 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 LPAR5Q9H1C0 372 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 KCNK15Q9H427 330 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 ZNF665Q9H7R5 613 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 PATZ1Q9HBE1 687 aaKnown RBP6.97□□□□□ -1.29
CCL28-204ENST00000514421 NUDT15Q9NV35 164 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 C1orf123Q9NWV4 160 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 KCNS2Q9ULS6 477 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 MRPS28Q9Y2Q9 187 aaKnown RBP6.97□□□□□ -1.29
CCL28-204ENST00000514421 DYSFO75923 2080 aa6.97□□□□□ -1.29
CCL28-204ENST00000514421 A0A0A6YYJ9 748 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 A6NLC8 198 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 ZNF732B4DXR9 585 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 FAM157AC9JC47 383 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 LGALS8O00214 317 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 NDUFA2O43678 99 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 PEX14O75381 377 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 ZNF205O95201 554 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 NRASP01111 189 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 LHBP01229 141 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 IGHV2-5P01817 119 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 MT-ND4P03905 459 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 IL5P05113 134 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 WNT2P09544 360 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 H2AFB2P0C5Z0 115 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 AKAIN1P0CW23 69 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 FAHP16930 419 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 NAT1P18440 290 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 TBPP20226 339 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 PRKACBP22694 351 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 RBMXP38159 391 aaKnown RBP6.96□□□□□ -1.3
CCL28-204ENST00000514421 OR3A4PP47883 348 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 DVL1P1P54792 670 aaPredicted RBP6.96□□□□□ -1.3
CCL28-204ENST00000514421 RAB25P57735 213 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 RPS27AP62979 156 aaKnown RBP6.96□□□□□ -1.3
CCL28-204ENST00000514421 GNG3P63215 75 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 ZNF154Q13106 437 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 KCNJ8Q15842 424 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 PNLIPRP3Q17RR3 467 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 MOGAT2Q3SYC2 334 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 FAM201AQ5SY85 155 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 ATAD3CQ5T2N8 411 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 CD276Q5ZPR3 534 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 ZNF826PQ6ZT77 177 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 RNF144BQ7Z419 303 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 PNLDC1Q8NA58 520 aaKnown RBP6.96□□□□□ -1.3
CCL28-204ENST00000514421 DEFB108BQ8NET1 73 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 Q8NFD4 153 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 OR10R2Q8NGX6 335 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 GCDHQ92947 438 aaPredicted RBP6.96□□□□□ -1.3
CCL28-204ENST00000514421 TMEM246Q9BRR3 403 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 ALX4Q9H161 411 aaPredicted RBP6.96□□□□□ -1.3
CCL28-204ENST00000514421 TLNRD1Q9H1K6 362 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 C20orf85Q9H1P6 137 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 NEK6Q9HC98 313 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 TMEM160Q9NX00 188 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 SLC2A8Q9NY64 477 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 IL36GQ9NZH8 169 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 MIOXQ9UGB7 285 aa6.96□□□□□ -1.3
CCL28-204ENST00000514421 YLPM1P49750 1951 aaKnown RBP6.95□□□□□ -1.3
CCL28-204ENST00000514421 A0A0A6YYD4 124 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 TRAV38-1A0A0B4J264 116 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 TRAV20A0A0B4J274 112 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 hCG_1807616A0A1W2PRN6 198 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 OR5B21A6NL26 309 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 INAFM1C9JVW0 142 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 MFNGO00587 321 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 AKR7A2O43488 359 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 FOXH1O75593 365 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 MSMBP08118 114 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 HCKP08631 526 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 PTHLHP12272 177 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 RCVRNP35243 200 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 EIF2B2P49770 351 aaKnown RBP6.95□□□□□ -1.3
CCL28-204ENST00000514421 GPM6AP51674 278 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 CCR6P51684 374 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 TAS2R19P59542 299 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 ARL6IP1Q15041 203 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 CNN3Q15417 329 aaKnown RBP6.95□□□□□ -1.3
CCL28-204ENST00000514421 RBMS2Q15434 407 aaKnown RBP6.95□□□□□ -1.3
CCL28-204ENST00000514421 PLCXD3Q63HM9 321 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 AWAT2Q6E213 333 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 OR10K2Q6IF99 312 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 GLIPR1L1Q6UWM5 242 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 WDR82Q6UXN9 313 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 LHFPL2Q6ZUX7 228 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 WDR86Q86TI4 376 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 GCSAMQ8N6F7 178 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 BOLLQ8N9W6 283 aaKnown RBP6.95□□□□□ -1.3
CCL28-204ENST00000514421 SCCPDHQ8NBX0 429 aa6.95□□□□□ -1.3
CCL28-204ENST00000514421 TMEM104Q8NE00 496 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms